DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17187 and dnj-28

DIOPT Version :9

Sequence 1:NP_650056.1 Gene:CG17187 / 41351 FlyBaseID:FBgn0037882 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_491084.1 Gene:dnj-28 / 171870 WormBaseID:WBGene00001046 Length:494 Species:Caenorhabditis elegans


Alignment Length:64 Identity:25/64 - (39%)
Similarity:40/64 - (62%) Gaps:3/64 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 YDLLGISLESDQNEIRKAYRKKALECHPDKNPD---NPKAVERFHELSKALEILTDESARAAYD 72
            |.:||:...:::.||.|||||.|.:.|||...|   ..||.::|.:::.|.|:|::|..|.|:|
 Worm   382 YKILGVRRNANKREITKAYRKMAQKWHPDNFQDEKEKKKAEKKFIDIAAAKEVLSNEEKRRAFD 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17187NP_650056.1 DnaJ 10..72 CDD:278647 24/62 (39%)
RRM_DNAJC17 175..247 CDD:240875
dnj-28NP_491084.1 TPR_11 23..89 CDD:290150
TPR repeat 28..52 CDD:276809
TPR_1 <31..56 CDD:278916
TPR repeat 57..87 CDD:276809
TPR_9 78..136 CDD:290108
TPR repeat 92..116 CDD:276809
TPR_11 174..240 CDD:290150
TPR repeat 175..203 CDD:276809
TPR repeat 208..238 CDD:276809
TPR repeat 291..321 CDD:276809
TPR_11 294..356 CDD:290150
TPR repeat 326..352 CDD:276809
DnaJ 378..>445 CDD:223560 24/62 (39%)
DnaJ 380..445 CDD:278647 24/62 (39%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164719
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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