DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17187 and dnajc18

DIOPT Version :9

Sequence 1:NP_650056.1 Gene:CG17187 / 41351 FlyBaseID:FBgn0037882 Length:299 Species:Drosophila melanogaster
Sequence 2:NP_001096348.1 Gene:dnajc18 / 100124938 XenbaseID:XB-GENE-5795683 Length:483 Species:Xenopus tropicalis


Alignment Length:252 Identity:69/252 - (27%)
Similarity:108/252 - (42%) Gaps:52/252 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SKKYSDVNLYDLLGISLESDQNEIRKAYRKKALECHPDKNPDNPKAVERFHELSKALEILTDESA 67
            |:|..:.:.|.|||:|.::::..:||||.|.||..||||| .:|.|.|.|..:.||..:|:|.:.
 Frog   104 SRKEEEDDYYSLLGVSKDANEETVRKAYLKLALRYHPDKN-SSPGATETFKAIGKAFSVLSDPAQ 167

  Fly    68 RAAYDKVLKAKKAAELRSR---QLDGKRQKLKLELEERERAALHKLAK--SQPYSTVAKSDEEVL 127
            |.:||.       |:.::|   |.|...:.| .:|..:.....:..::  .||.||..:..:   
 Frog   168 RKSYDD-------AQAKARVVSQPDLTTEDL-FDLFFKGHFPGYAFSQQYQQPRSTNRRQGD--- 221

  Fly   128 HEQIERLRREGSRLLEEEQRAMQEQFRRNHAEQQKLQQQPVQFDSAQHRIKM-KW-----KAEPG 186
                     .|.|..|||:...::|:|:....:|...::....:..|....| ||     |.|.|
 Frog   222 ---------RGQRWEEEEEEDGRQQWRQGEDTRQDRGRERKWSEERQGGGPMPKWWEREKKPESG 277

  Fly   187 ---------QDYTQQELL--------KYLKKYGDVVALVVNSKRRGRAMVELATREA 226
                     ||..|.::.        |...|:.|..|   ...||.|...||..:||
 Frog   278 KGRWSKNAKQDGRQSKVNEEKRNDGGKGRPKWRDAKA---QDNRRSRWREELGRQEA 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17187NP_650056.1 DnaJ 10..72 CDD:278647 26/61 (43%)
RRM_DNAJC17 175..247 CDD:240875 20/75 (27%)
dnajc18NP_001096348.1 DnaJ 111..172 CDD:306689 26/61 (43%)
Rho <213..>346 CDD:333130 31/134 (23%)
DUF1977 375..473 CDD:312722
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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