DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GCC88 and Gcc1

DIOPT Version :9

Sequence 1:NP_650055.1 Gene:GCC88 / 41350 FlyBaseID:FBgn0037881 Length:695 Species:Drosophila melanogaster
Sequence 2:NP_083176.3 Gene:Gcc1 / 74375 MGIID:1921625 Length:778 Species:Mus musculus


Alignment Length:799 Identity:233/799 - (29%)
Similarity:405/799 - (50%) Gaps:164/799 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QRELEALVSTQKEQLGRYEKRLKDVVTAYKGLLKEKEALETS---LAAHAEATAVGESG------ 60
            :::|...:.|||:||.:|:.||||||.|||.|||||||||.|   |:...||. ||.||      
Mouse    14 KKDLLETIETQKKQLLQYQARLKDVVRAYKSLLKEKEALEASIKVLSVSHEAD-VGLSGVQPPGL 77

  Fly    61 -----------SPARELESKKTSTDSADGAT----------EGAAPGPPAP-------------- 90
                       :.:.:.....||.|:|...|          :.||.||..|              
Mouse    78 TFPDSVDDRCSTHSEDSTGTATSLDTAASLTSVKGEFGVEDDRAARGPLPPKSEEASGSESGVSS 142

  Fly    91 -----PAEG--------QLQTQIITLMNSLATLSAEKSRMEASFQADKKQLRSQIAQKEQTIQEL 142
                 |:.|        ||:||:.||.:||||::.||||||||:.||||:::       |.:::.
Mouse   143 SSGDGPSAGSEMDKRVHQLKTQLATLTSSLATVTQEKSRMEASYLADKKKMK-------QDLEDA 200

  Fly   143 NTRAKEQAARAKSD-------VDEIKAKWIVERQEREKETNNQMLMIRELQKLYADERHLKDNIE 200
            |.:|:|:..|.:.|       :.|.||:.|.::.:|.:|.::..||:||||||..:||..:.::|
Mouse   201 NKKAEEERGRLEGDLKVLQEQIAETKARLITQQHDRAQEQSDHALMLRELQKLLQEERTQRQDLE 265

  Fly   201 MQLNNFK-----TQFASNEAENSRL--RELQSQLKEARSQLKQFQAKTEHSAAASASADSAALLQ 258
            ::|...:     ..:|:::.|...|  ::|..:::|.:.:|:..:.:.......         ||
Mouse   266 LRLEETREALAGRAYAADQVEGFELQTKQLTREVEELKGELQTIRDEKNRPDPR---------LQ 321

  Fly   259 QVRLEMQQLKEQHAVAIRQEQRRVLRAEEQSRRQAALHEDRVASLEARLAELSTTVGSYDRLRQQ 323
            :::.|..:||......::||.|:...||:|.|:|:.:.|.|||:||::::|:|..:|:|::.:|:
Mouse   322 ELQQEAARLKSHFQAQLQQEMRKTALAEDQLRQQSQVEEQRVAALESQISEVSELLGTYEKAKQK 386

  Fly   324 DQDSIHDLKQQL--QDLEQAHVRPTSNSRAL------NEDVDVATLVDEMVRLKKLLTTANARSA 380
            ||.:|..||::|  .|||...:...::||:.      ...:|:..|.|:|.:|||||..|..:|.
Mouse   387 DQLAIQKLKERLLQLDLENKTLALAASSRSSLDIHGDESSLDINVLKDKMEKLKKLLQVAARKSQ 451

  Fly   381 NPLDL-----GEILSFS----GQTATRVESHAHCEQQLQGVQQMLEASKQQRQL----------- 425
            ..||:     .||::.|    |:.||.:    :.:|:|:.:::..|..|.:.|:           
Mouse   452 VTLDVEKLCDPEIMANSEAADGEKATAL----YYQQELKQLKEEFERYKMRAQVVLKSKNTKDGS 512

  Fly   426 LEQKVQLQHSHIQTLQEKVQVLNRNIDEAEVELKQQGEKLRLALKNERTKWQEA-KAELEN---E 486
            |.::::.....:..|::|...|..:.:|.|.:.:|:.|.    .|.|..:.|:. :.|||.   :
Mouse   513 LGKELEAAQEQLAELKDKYISLRLSCEELESQHQQEAED----WKQELARLQQLHRQELERSQLD 573

  Fly   487 TRCKLNELEQLLQKQRQRSLQLLDEKEQEIKTLQTSFEVFHSASGV-----------GSTLATPT 540
            .|.:..:||:.|.|||.|:|.:|.||:.|::.|::    ...:||:           |..|..|.
Mouse   574 FRDRTLKLEEELHKQRDRALAVLAEKDLELEQLRS----VALSSGLPGRRSPVGGVGGGGLGDPA 634

  Fly   541 LEAAADSFHYSSDTDSVEGEQRERKLKVRSKKMSMGENCHMLHYANELARKDIEITTLRKAKYAA 605
            ..|::||.                   .::.:::.........||.:||||::|||:|||.|:..
Mouse   635 DTASSDSL-------------------TQALQLAAANEPTFFLYAEQLARKEVEITSLRKQKHRL 680

  Fly   606 ESTLRKAIQDKVTSQQEMH-EKIECLKEQVDRLERCKTREGANLEYLKNVIISYIVTRDADGKRH 669
            |....: :|:::..:.|.| |::..|:..:::..|.::|||||||||||:|..::...|:.|::.
Mouse   681 EVEAHQ-LQERLLEEGERHREEVGALQSHIEKNMRDQSREGANLEYLKNIIYRFLTLPDSLGRQQ 744

  Fly   670 MLNAISAVLQFTAAEMQAI 688
            .|.||..:|.|:..|.|.:
Mouse   745 TLTAILTILHFSPEEKQVL 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCC88NP_650055.1 GRIP 646..688 CDD:279767 18/41 (44%)
Gcc1NP_083176.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..157 14/86 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..208 8/28 (29%)
DUF342 <389..506 CDD:302792 33/120 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 617..638 3/20 (15%)
GRIP 721..763 CDD:279767 18/41 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167837883
Domainoid 1 1.000 243 1.000 Domainoid score I2204
eggNOG 1 0.900 - - E1_28HRG
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11567
Inparanoid 1 1.050 281 1.000 Inparanoid score I2877
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006884
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_107068
Panther 1 1.100 - - LDO PTHR23157
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5435
SonicParanoid 1 1.000 - - X5782
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.780

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