DRSC/TRiP Functional Genomics Resources

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Protein Alignment GCC88 and Gcc1

DIOPT Version :10

Sequence 1:NP_650055.1 Gene:GCC88 / 41350 FlyBaseID:FBgn0037881 Length:695 Species:Drosophila melanogaster
Sequence 2:NP_083176.3 Gene:Gcc1 / 74375 MGIID:1921625 Length:778 Species:Mus musculus


Alignment Length:14 Identity:7/14 - (50%)
Similarity:8/14 - (57%) Gaps:3/14 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 DVYHENKKIGLAHI 108
            ||:|.|   |..||
Mouse   612 DVHHGN---GTQHI 622

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCC88NP_650055.1 Smc <33..>341 CDD:440809 7/14 (50%)
SMC_prok_B 219..>527 CDD:274008
GRIP 645..688 CDD:460221
Gcc1NP_083176.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 70..157
Smc <164..>711 CDD:440809 7/14 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 186..208
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 617..638 4/9 (44%)
GRIP 720..763 CDD:460221
Blue background indicates that the domain is not in the aligned region.

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