DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GCC88 and gcc1

DIOPT Version :9

Sequence 1:NP_650055.1 Gene:GCC88 / 41350 FlyBaseID:FBgn0037881 Length:695 Species:Drosophila melanogaster
Sequence 2:NP_001003599.1 Gene:gcc1 / 445205 ZFINID:ZDB-GENE-040801-118 Length:802 Species:Danio rerio


Alignment Length:797 Identity:249/797 - (31%)
Similarity:407/797 - (51%) Gaps:135/797 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QRELEALVSTQKEQLGRYEKRLKDVVTAYKGLLKEKEALETSL---------------------- 47
            ::||...:..||:||.:|:.|.||||.||:.|||||||||.||                      
Zfish    14 KKELLETIEVQKKQLVKYQTRFKDVVRAYQSLLKEKEALEASLKVLTISQEVDLSRVDNLSFGEA 78

  Fly    48 -------------------------AAHAE-ATAVGESGSPARELESKKTSTDSADGATEGA--- 83
                                     ||.|| ||:|..:.:...::|..::.  :.||||.||   
Zfish    79 SGSRALPSDLGDDRCSLHSEDSLDTAASAETATSVTSNSTKGDQIEDDQSC--AVDGATAGAVVH 141

  Fly    84 --------APG-------------PPAPPAEG------QLQTQIITLMNSLATLSAEKSRMEASF 121
                    |.|             .|.|....      ||:||:.||.:||||::.|||||||||
Zfish   142 TSPQQSEEASGSESGVSTSSSGCSEPTPQVADTDRRVIQLKTQLSTLTSSLATVTQEKSRMEASF 206

  Fly   122 QADKKQLRSQIAQKEQTIQELNTRAKEQAARAKSDVDEIKAKWIVERQEREKETNNQMLMIRELQ 186
            ||||::::.::.:.:..::|...:.:.:....:....|.||:.|.::.|||:|..:..||:||||
Zfish   207 QADKRKMKQELEELQARLEEDKKQHQAELQNLQEQFAESKARVITQQHEREQEQGDHALMLRELQ 271

  Fly   187 KLYADERHLKDNIEMQLNNFKTQFASNEAENSRLRELQSQLKEARSQLKQFQAKTEHSAAASASA 251
            ||..:||.|:.:.|::|.:.:...|.......|..:.:|||||...:.::.:...:.:|..::..
Zfish   272 KLLQEERGLRQDAELKLEDARATLAEAMQAADRGLDYESQLKEIIQEREELKKSLKAAAVENSKP 336

  Fly   252 DSAALLQQVRLEMQQLKEQHAVAIRQEQRRVLRAEEQSRRQAALHEDRVASLEARLAELSTTVGS 316
            |..  :::::.|...||......::||.|:|.:|:|..|.||.:.|.||||||.|::|||..:|:
Zfish   337 DPR--VEELQQENADLKAHFNQQLQQEIRKVAQADELLREQAKMEEIRVASLEERVSELSELLGA 399

  Fly   317 YDRLRQQDQDSIHDLKQQLQDLE-------QAHVRPTSNSRALNED---VDVATLVDEMVRLKKL 371
            .::.||:||.:...|::::..|:       .|.|..|::| .||.|   ::|..|.|::.::|||
Zfish   400 CEKARQKDQQNTQRLRERILQLDTENKTLAMAAVNRTTSS-DLNMDDMNLNVDALKDKLEKVKKL 463

  Fly   372 LTTANARSAN-PLDLGEILSFSGQTATRVE-----SHAHCEQQLQGVQQMLEASKQQRQ-LLEQK 429
            |..|..||.: .||:.::|. .|:....|.     |..|.:|:|:.:::..|..|.:.| :|:.|
Zfish   464 LLLAAQRSQDQSLDIEKLLE-GGEKDHEVSESEKASALHYQQELRQIKEEFERYKMRAQGVLKNK 527

  Fly   430 --------VQLQHSHIQTLQEKVQVLNRNI--DEAEVELKQQGEKLRLALKN-ERTKWQEAKAEL 483
                    .:|:.:..|..:.|.:.:|..|  |||||:.|:..|:.:..|.. ::|..||.: :|
Zfish   528 NTKDGNQAKELEEARDQLAELKEKYINLRIQSDEAEVKHKRDLEERQQGLAALQQTHKQEVE-KL 591

  Fly   484 ENETRCKLNELEQLLQKQRQRSLQLLDEKEQEIKTLQTSFEVFHSASGVGS-----TLATPTLEA 543
            |.:.|.....||:.|.|||.|::.||.||:.|::.|:.|     :..|.||     ..::..|| 
Zfish   592 EAQHRENFMRLEEELHKQRDRTMALLAEKDLELERLRAS-----AVMGFGSHQRHIINSSTALE- 650

  Fly   544 AADSFHYSSDTDSVEGEQRERKLKVRSKKMSMGENCHMLHYANELARKDIEITTLRKAKYAAEST 608
                   ..|.|.|:.||.|..:..::.|::......:|.||.:||||::|:..|||.|:..|..
Zfish   651 -------GGDLDEVDPEQEESDIIAQALKLAGPNEPTLLLYAEQLARKEVEVAALRKQKHRLEED 708

  Fly   609 LRKAIQDKVTSQQEMHEK--IECLKEQVDRLERCKTREGANLEYLKNVIISYIVTRDADGKRHML 671
            |.: :|.|:.:..|.||:  :| |:.|:|:..|.|.|:|||||||||||..::..:|..|::..|
Zfish   709 LHQ-LQGKLIANGERHEEELVE-LRGQLDKRIRDKGRDGANLEYLKNVIYKFLTLQDTRGRQQTL 771

  Fly   672 NAISAVLQFTAAEMQAI 688
            .||..:|.|:..|.|.:
Zfish   772 TAILTILHFSPQEKQVV 788

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCC88NP_650055.1 GRIP 646..688 CDD:279767 19/41 (46%)
gcc1NP_001003599.1 Tho2 182..>248 CDD:288156 24/65 (37%)
SbcC 196..>755 CDD:223496 185/578 (32%)
DUF3585 <337..428 CDD:304905 31/92 (34%)
GRIP 746..788 CDD:279767 19/41 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581652
Domainoid 1 1.000 258 1.000 Domainoid score I1962
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11567
Inparanoid 1 1.050 300 1.000 Inparanoid score I2667
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D415424at33208
OrthoFinder 1 1.000 - - FOG0006884
OrthoInspector 1 1.000 - - oto41118
orthoMCL 1 0.900 - - OOG6_107068
Panther 1 1.100 - - LDO PTHR23157
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5435
SonicParanoid 1 1.000 - - X5782
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.890

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