DRSC/TRiP Functional Genomics Resources

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Protein Alignment GCC88 and cbs

DIOPT Version :9

Sequence 1:NP_650055.1 Gene:GCC88 / 41350 FlyBaseID:FBgn0037881 Length:695 Species:Drosophila melanogaster
Sequence 2:NP_610875.1 Gene:cbs / 36492 FlyBaseID:FBgn0086757 Length:611 Species:Drosophila melanogaster


Alignment Length:730 Identity:147/730 - (20%)
Similarity:283/730 - (38%) Gaps:207/730 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 KEKEALETSLAAHAEATAVGESGSPARELESKKTS--TDSADGATEGAAPGPPAPPAE-----GQ 95
            |.||.....:...|.....|.:.:..| |.|::.|  ::|||....|..........|     .:
  Fly     8 KIKEETGDDVVQSANQRYPGNNNNNYR-LRSRRVSINSNSADDVGGGGFYNESEQLCELRSQCNE 71

  Fly    96 LQTQIITLMNSLATLSAEKSRMEASFQADKKQLRSQIAQKE---------QTIQ--ELNTRAKEQ 149
            |.|::.|:...|..|..||:|::.:.:...:.:|....||:         |.:|  |::......
  Fly    72 LTTKLSTVTQGLQQLQEEKTRVDKTNEILLESVRVAQTQKDIYCEEQEKIQNLQQIEIDKLKNLL 136

  Fly   150 AARAKSDVDEIKAKWIVERQEREKET-NNQMLMIRELQKLYADER----HLKDNIEMQLNNFKTQ 209
            :.|.:..||.:   .::.:|.::.|: :.::..:|.::.:..|.|    .|:.:.:.:.|...|.
  Fly   137 SFREQESVDRM---GLMRQQTQQIESLSEELERLRPIESVAEDLRDELEQLRHSTQQEKNLLTTT 198

  Fly   210 FASNEAENSRLRELQSQLKEARSQLKQFQAKTEHSAAASASADSAALLQQVRLEMQQLKEQHA-- 272
            .|:.:.||..|::....::|:|         .|.....::.....||:::.:|..|.|:|.|.  
  Fly   199 LAAVQEENRHLKKRMKIVEESR---------LESLGKLNSEQQVQALIREHKLLEQHLEEAHLQL 254

  Fly   273 -----------VAIRQEQRRVLR--AEEQSRRQAAL--HEDRVASLEARLAELSTTVGSYDRLRQ 322
                       :|:..:..|:.:  |||.:.::.||  .:|.:.|.:....||..   :.|.::|
  Fly   255 SDIKGSWSGQNLALETQVSRLSKQVAEETTEKRKALKSRDDAIESRKQVSFELEK---AKDEIKQ 316

  Fly   323 QDQDSIHDLKQQLQDLEQA--HVRPTSNSRALNEDVDVATLVDEMVRLKKLLTTANARSANPLDL 385
            :| |.:..|::::.:|..|  ..|..:..:.|.|......|..|:..||..||.|:.|      .
  Fly   317 RD-DKVKLLEEEIDELSVALKECREENEQQVLFERNKSQNLETEVKDLKTRLTAADDR------F 374

  Fly   386 GEILSFSGQTATRVESH-AHCEQQLQGVQQMLEASKQQR--------------QLLEQKVQLQHS 435
            .|..|.:.|.|.::... ...::||......||..::::              .:|.|:::|:.|
  Fly   375 SEYSSNAEQVAQKLRVQVTEKQEQLDETIMQLEIEREEKMTAILRNAEIAQSEDILRQQLRLERS 439

  Fly   436 HIQTLQEKVQVLNRNIDEAEVELKQ-------QGEKLRLALKNERTKWQEAKAEL--ENETRCKL 491
            ....|||:...|.|:|.||...|:|       ..:||        |:::..:.|:  :|:|...|
  Fly   440 EASDLQERNNQLVRDISEARQTLQQVSSTAQDNADKL--------TEFERVQLEIIEKNKTIKTL 496

  Fly   492 N----ELEQLLQKQRQRSLQLLDEKEQEIKTLQTSFEVFHSASGVGSTLATPTLEAAADSFHYSS 552
            |    :|::.:||: .||.|:..:.|.            |..:..|..:::.:|||         
  Fly   497 NQRLIDLKKTVQKE-LRSAQISTDSES------------HPTTTPGHRISSSSLEA--------- 539

  Fly   553 DTDSVEGEQRERKLKVRSKKMSMGE--NCHMLHYANELARKDIEITTLRKAKYAAESTLRKAIQD 615
                                .|.|:  ||                                .|.|
  Fly   540 --------------------FSTGDKGNC--------------------------------VIMD 552

  Fly   616 KVTSQQEMHEKIECLKEQVDRLERCKTREGANLEYLKNVIISYIVTRDADGKRHMLNAISAVLQF 680
            :|                             |.:|||:||:.::.:|:.:. ||::.|:|.:||.
  Fly   553 EV-----------------------------NFQYLKHVIVKFLTSREVEA-RHLVRAVSTLLQL 587

  Fly   681 TAAEMQAINASFQKK 695
            |..|.:.::.:...|
  Fly   588 TTEEEKLLHDTLNWK 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCC88NP_650055.1 GRIP 646..688 CDD:279767 15/41 (37%)
cbsNP_610875.1 AmyAc_family <276..>372 CDD:298606 26/99 (26%)
Grip 553..598 CDD:197860 16/74 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45449972
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23157
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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