DRSC/TRiP Functional Genomics Resources

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Protein Alignment GCC88 and gcc1

DIOPT Version :9

Sequence 1:NP_650055.1 Gene:GCC88 / 41350 FlyBaseID:FBgn0037881 Length:695 Species:Drosophila melanogaster
Sequence 2:XP_002939415.1 Gene:gcc1 / 100380087 XenbaseID:XB-GENE-1007438 Length:704 Species:Xenopus tropicalis


Alignment Length:758 Identity:203/758 - (26%)
Similarity:368/758 - (48%) Gaps:158/758 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 QRELEALVSTQKEQLGRYEKRLKDVVTAYKGLLKEKEALETSL-----------------AAHAE 52
            ::||:..|.||::||.:|:.||||||.|||.|.|||||||.||                 .||.:
 Frog    14 KKELQEQVETQRKQLQQYQGRLKDVVRAYKSLQKEKEALEASLHVLSTTQEPGTLFSESEEAHDD 78

  Fly    53 ATAV-----------------GESGSPARELESKKTSTDSADGATEG----AAPGPPAPPAEG-- 94
            ..::                 ||:....|...|::...:.|.|:..|    :..|..|...|.  
 Frog    79 QHSIHSEDSVDTAGSLPSARGGETSEDERPDPSQRGGIEEASGSESGVSTASGEGGQATAVETDR 143

  Fly    95 ---QLQTQIITLMNSLATLSAEKSRMEASFQADKKQLRSQIAQKEQTIQELNTRAKEQAARAKSD 156
               ||:.|:.||.::|||::.||||||||:||||:..:.::.:...:..:..|:.:|:....:..
 Frog   144 KMVQLKNQLSTLTSALATVTQEKSRMEASYQADKRNAKQEMEELMLSFVQERTKLQEEIQSIQEQ 208

  Fly   157 VDEIKAKWIVERQEREKETNNQMLMIRELQKLYADERHLKDNIEMQLNNFKTQFASN-------- 213
            :.|.||:.|.::.:|.:|..:.::|::|||:|...||..:...|::|...:.:.|..        
 Frog   209 LAETKARLISQQHDRAQEQTDHVIMLKELQRLLQGERDHRQEAELRLEEARQELAGKLAGISELE 273

  Fly   214 ------EAENSRLR----ELQSQLKEARSQLKQFQAKTEHSAAASASADSAALLQQVRLEMQQLK 268
                  |.:|.:||    ||:.::.|||.|              .|..|.|  :::::.|:.::|
 Frog   274 GRSEVAEEQNRKLRKDLEELRKEIMEARRQ--------------GAEPDPA--VKKLQAELDRVK 322

  Fly   269 EQHAVAIRQEQRRVLRAEEQSRRQAALHEDRVASLEARLAELSTTVGSYDRLRQQDQDSIHDLKQ 333
            |:....:::|:::.|..|:::.::....|.|:.|||::::|:|..:|:.:..:|:||.:|..|::
 Frog   323 EEMHALLQEERKKKLDEEQETMQRFLQEEQRICSLESQVSEMSELLGAAETSKQRDQATIRKLRE 387

  Fly   334 QLQDLEQAHVRPTSNSRALNEDVDVATLVDEMVRLKKLLTTANARSANPLDLGEILSFSGQTATR 398
            :|..||     ..:.:.||...:...:.|           |.|......:|.|.           
 Frog   388 RLIQLE-----AENKTLALTSSMQTPSEV-----------TFNFNKGEDMDEGP----------- 425

  Fly   399 VESHAHC---EQQLQGVQQMLEASKQQRQ-------LLEQKVQLQHSHIQTLQEKVQVLNRNIDE 453
             |.||..   :|:||.:::..|..|.:.|       ..|.:::.....:..|:|:...|..:.:|
 Frog   426 -EQHASVLFYQQELQQLKEEFERYKSRAQGVLRTKGAREGELEAGKKQMAELKERCVSLRLSAEE 489

  Fly   454 AE----VELKQQGEKLRLALKNERTKWQEAKAELENETRCKLNELEQLLQKQRQRSLQLLDEKEQ 514
            ||    .|::...:::.|.|::.|   ||.:: :..|.|..:..||:.:::.|:|.|.:|.||||
 Frog   490 AESQHKAEMEAAQKQIALMLQSHR---QELES-VRKEGRDNMARLEEEVRQHRERVLAVLAEKEQ 550

  Fly   515 EIKTLQTSFEVFHSASGVGSTLATPTLEAAADSFHYSSDTDSVEGEQRERKLKVRSKKMSMGENC 579
            |::.|:        .:.:.|.:....|::..:..                       ::|.|.:.
 Frog   551 ELEKLR--------ETKITSVVPLSVLDSIGNGL-----------------------ELSQGASS 584

  Fly   580 HMLHYANELARKDIEITTLRKAKYAAESTLRKAIQDKVTSQQEMHEKIECLKEQVDRLERCKTRE 644
            ..:.||.:|:||:.||..||:.|:..||.| :::|:|:..|:   |:...|:||:.:..|.:.||
 Frog   585 TFIVYAEQLSRKEAEIGNLRRRKHELESEL-QSMQEKLAEQK---EEANILQEQMKKNVRDRRRE 645

  Fly   645 GANLEYLKNVIISYIVTRDADGKRHMLNAISAVLQFTAAEMQA 687
            |||:||||||::.|:...|..|::|.|:|:.|||.|:..|..|
 Frog   646 GANMEYLKNVLLGYLTLPDPRGRQHTLSALLAVLHFSPEERNA 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCC88NP_650055.1 GRIP 646..688 CDD:279767 20/42 (48%)
gcc1XP_002939415.1 Smc <123..478 CDD:224117 95/398 (24%)
SMC_prok_B <332..651 CDD:274008 92/385 (24%)
GRIP 646..688 CDD:366655 20/41 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 204 1.000 Domainoid score I2886
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 247 1.000 Inparanoid score I3197
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D415424at33208
OrthoFinder 1 1.000 - - FOG0006884
OrthoInspector 1 1.000 - - oto102599
Panther 1 1.100 - - LDO PTHR23157
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5435
SonicParanoid 1 1.000 - - X5782
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.100

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