DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and AT1G50060

DIOPT Version :10

Sequence 1:NP_650053.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_175428.1 Gene:AT1G50060 / 841430 AraportID:AT1G50060 Length:161 Species:Arabidopsis thaliana


Alignment Length:183 Identity:40/183 - (21%)
Similarity:67/183 - (36%) Gaps:47/183 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 SENCPKDVREVKIEPHHKLILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLAL--LNVK 103
            ::|.|:|            .||..|..|..|      |:|..|      |...|:..||  .|.:
plant    23 AQNTPQD------------YLNSHNTARAQV------GVPNVV------WDTTLAAYALNYSNFR 63

  Fly   104 TCESLPDKCRSTERFAYAGQNNAVFQYSGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEE 168
            ..:     |.........|:|.|    .|:.:.::....:|    .|..|:    |....::...
plant    64 KAD-----CNLVHSNGPYGENLA----KGSSSSFSAISAVK----LWVDEK----PYYSYAYNNC 111

  Fly   169 LPNKAVTKFTIAVAEKNTHVGCAAVRFSRDFYNHFVLTCNF-ATSNIVGQPVY 220
            ...|....:|..|...:..:|||.|:.:..::  || :||: :..|.||:..|
plant   112 TGGKQCLHYTQVVWRDSVKIGCARVQCTNTWW--FV-SCNYNSPGNWVGEYPY 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_650053.1 CAP_euk 57..210 CDD:349399 33/155 (21%)
AT1G50060NP_175428.1 CAP_PR-1 27..161 CDD:349400 38/177 (21%)

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