DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and AT1G50050

DIOPT Version :9

Sequence 1:NP_001287282.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_175427.1 Gene:AT1G50050 / 841429 AraportID:AT1G50050 Length:226 Species:Arabidopsis thaliana


Alignment Length:95 Identity:24/95 - (25%)
Similarity:37/95 - (38%) Gaps:25/95 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 FTIAVAEKNTHVGCAAVRFSRDFYNHFVLTCNFATS------NIVGQPVYTPGEKATTGC---KN 232
            :|..|...:..:|||.|..:...|  || .||:..|      .|......|.|..|:..|   :|
plant   121 YTQVVWSNSVKIGCARVLCNNGGY--FV-GCNYDASAALKSRKITASVRQTRGLGASAACGQLRN 182

  Fly   233 RYGAAYDYPNLCYAK----------EIYDN 252
            ::..:   |:|..|:          |.:||
plant   183 KFQKS---PSLATAEGEVIEARLRSEDFDN 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_001287282.1 SCP_euk 58..210 CDD:240180 11/32 (34%)
AT1G50050NP_175427.1 SCP 27..151 CDD:294090 11/32 (34%)
Radical_SAM <155..185 CDD:302752 6/29 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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