DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and AT5G57625

DIOPT Version :9

Sequence 1:NP_001287282.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_680450.1 Gene:AT5G57625 / 835867 AraportID:AT5G57625 Length:207 Species:Arabidopsis thaliana


Alignment Length:175 Identity:35/175 - (20%)
Similarity:59/175 - (33%) Gaps:52/175 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 KLILNLFNELRNNVAGGKIEGLPKAVRMAKMS-----WCEELSHLALLNVKTCESLPDKCRSTER 117
            :|.|:..|.||:.:      |||..:...|::     |..:..:              .|..|..
plant    73 RLFLDPHNALRSGL------GLPPLIWDGKLASYATWWANQRRY--------------DCSLTHS 117

  Fly   118 FAYAGQNNAVFQYSGAETEYTDAEIIKEQIENWFAE------RSNASPEILASFPEELPNKAVTK 176
            ....|:|  :|..||:......|      :::|..|      .:|:..          .:.....
plant   118 TGPYGEN--LFWGSGSSWAPGFA------VQSWIVEGRSYNHNTNSCD----------GSGMCGH 164

  Fly   177 FTIAVAEKNTHVGCAAVRFSRDFYNHFVLTCNF-ATSNIVGQPVY 220
            :|..|......:|||.| ...:....|: |||: ...|.||:..|
plant   165 YTQMVWRDTKRLGCARV-VCENGAGVFI-TCNYDPPGNYVGEKPY 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_001287282.1 SCP_euk 58..210 CDD:240180 31/163 (19%)
AT5G57625NP_680450.1 CAP_PR-1 72..207 CDD:349400 34/173 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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