DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and AT5G26130

DIOPT Version :9

Sequence 1:NP_001287282.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_197985.2 Gene:AT5G26130 / 832682 AraportID:AT5G26130 Length:166 Species:Arabidopsis thaliana


Alignment Length:113 Identity:31/113 - (27%)
Similarity:41/113 - (36%) Gaps:43/113 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 ERFAYAGQNNAVFQYSGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPN-----KAVT 175
            |..|::|.     ..||||.           ::.|..|:|:   .|.||      |     |...
plant    84 ENLAWSGG-----ALSGAEA-----------VKLWVNEKSD---YIYAS------NTCSDGKQCG 123

  Fly   176 KFTIAVAEKNTHVGCAAVRFSRDFYNHFVLTCNFATSNIVGQPVYTPG 223
            .:|..|...:..||||.|:.  |....|| |||:          |.||
plant   124 HYTQVVWRTSEWVGCAKVKC--DNGGTFV-TCNY----------YPPG 158

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_001287282.1 SCP_euk 58..210 CDD:240180 28/98 (29%)
AT5G26130NP_197985.2 CAP_PR-1 31..166 CDD:349400 31/113 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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