DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and AT4G33710

DIOPT Version :9

Sequence 1:NP_001287282.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_195097.1 Gene:AT4G33710 / 829513 AraportID:AT4G33710 Length:166 Species:Arabidopsis thaliana


Alignment Length:174 Identity:42/174 - (24%)
Similarity:68/174 - (39%) Gaps:36/174 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 VKIEPHHKLILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRST 115
            :|.:...:..|::.|..|::|:...|:....|.|.|   |     :.|....:.|..:    .|.
plant    25 LKAQDRRQDYLDVHNHARDDVSVPHIKWHAGAARYA---W-----NYAQRRKRDCRLI----HSN 77

  Fly   116 ERFAYAGQNNAVFQYSGAETEYTDAEIIKEQIENWFAERS---NASPEILASFPEELPNKAVTKF 177
            .|..| |:|.|   :|..:.....|      :..|..|:|   :.|....|       .|....:
plant    78 SRGRY-GENLA---WSSGDMSGAAA------VRLWVREKSDYFHKSNTCRA-------GKQCGHY 125

  Fly   178 TIAVAEKNTHVGCAAVRFSRDFYNHFVLTCNFA-TSNIVGQPVY 220
            |..|.:.:..||||.|:.  |....|| |||:: ..|:.|:..|
plant   126 TQVVWKNSEWVGCAKVKC--DNGGTFV-TCNYSHPGNVRGRRPY 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_001287282.1 SCP_euk 58..210 CDD:240180 38/154 (25%)
AT4G33710NP_195097.1 CAP_PR-1 32..166 CDD:349400 40/165 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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