DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and AT4G31470

DIOPT Version :9

Sequence 1:NP_001287282.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_194875.1 Gene:AT4G31470 / 829274 AraportID:AT4G31470 Length:185 Species:Arabidopsis thaliana


Alignment Length:233 Identity:46/233 - (19%)
Similarity:80/233 - (34%) Gaps:78/233 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LILLTSLLGISLAADYCALPT------CLDKHIACNNKGNFSENCPKDVREVKIEPHHKLILNLF 64
            :::.|.|..:|........||      ..||.:|.|.           :::..:.||        
plant    13 IVISTPLPSLSFQIPSNRTPTTSTLIFSQDKALARNT-----------IQQQFLRPH-------- 58

  Fly    65 NELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAYAGQNNAVFQ 129
                 |:...|:       |:..:.|.   :.|||...:...:....|:........|:|  :|.
plant    59 -----NILRAKL-------RLPPLKWS---NSLALYASRWARTRRGDCKLIHSGGPYGEN--LFW 106

  Fly   130 YSGAETEYTDAEIIKEQIENWFAE---------RSNASPEILASFPEELPNKAVTKFTIAVAEKN 185
            .||......||      :..|.:|         ...|:.:.|             .:|..|.:|:
plant   107 GSGKGWTPRDA------VAAWASEMKYYDRRTSHCKANGDCL-------------HYTQLVWKKS 152

  Fly   186 THVGCAAVRFSR--DFYNHFVLTCNF-ATSNIVGQPVY 220
            :.:|| |:.|.:  |.:    :.||: ...||||||.:
plant   153 SRIGC-AISFCKTGDTF----IICNYDPPGNIVGQPPF 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_001287282.1 SCP_euk 58..210 CDD:240180 29/163 (18%)
AT4G31470NP_194875.1 CAP_PR-1 51..185 CDD:349400 37/182 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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