DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and AT4G30320

DIOPT Version :9

Sequence 1:NP_001287282.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_194761.1 Gene:AT4G30320 / 829155 AraportID:AT4G30320 Length:161 Species:Arabidopsis thaliana


Alignment Length:162 Identity:33/162 - (20%)
Similarity:56/162 - (34%) Gaps:65/162 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 VRMAKMSWCEELSHLA--LLNVKTCESLPDKCRSTERFAYAGQNNAVFQYSG-----AETEYTDA 140
            :|:..:.|..:|:..|  ..|.:..:     |..|......|:|  :|..||     ::..|   
plant    41 LRLKPLKWDAKLARYAQWWANQRRGD-----CALTHSNGPYGEN--LFWGSGNRWGPSQAAY--- 95

  Fly   141 EIIKEQIENWFAE------RSNA-SPEILASFPEELPNKAVTKFTIAVAEKNTH-VGCAAVRFSR 197
                    .|.:|      |||: :.|:...:.:             :..|||. :|||      
plant    96 --------GWLSEARSYNYRSNSCNSEMCGHYTQ-------------IVWKNTQKIGCA------ 133

  Fly   198 DFYNHFV--------LTCNF-ATSNIVGQPVY 220
                |.:        ||||: ...|.:|:..|
plant   134 ----HVICNGGGGVFLTCNYDPPGNFLGRKPY 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_001287282.1 SCP_euk 58..210 CDD:240180 30/150 (20%)
AT4G30320NP_194761.1 CAP_PR-1 27..161 CDD:349400 32/160 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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