DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and AT4G07820

DIOPT Version :9

Sequence 1:NP_001287282.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_192524.1 Gene:AT4G07820 / 826263 AraportID:AT4G07820 Length:160 Species:Arabidopsis thaliana


Alignment Length:147 Identity:26/147 - (17%)
Similarity:54/147 - (36%) Gaps:42/147 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 AVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAYAGQNNAVFQYSGAETEYTDAEIIKEQ 146
            :|.::.:.|.:.|:..|       ::..:|.|....|...|..               .|.||..
plant    42 SVGVSPLMWSQTLTAYA-------QAYAEKRRDCGLFLSGGPY---------------GETIKAD 84

  Fly   147 IENWFAERSNASPEILASFPEELPN-----------KAVTKFTIAVAEKNTHVGCAAVRFSRDFY 200
            |.::.||      |.:::|..:..:           |:...:...:..|:..:|||.|:.:.   
plant    85 IIDFSAE------EFVSTFLNQKSDYDYTTNTCRAGKSCDGYKQVLFRKSVFLGCAKVKCNN--- 140

  Fly   201 NHFVLTCNFATSNIVGQ 217
            ..|:..|::..|.|:.:
plant   141 GGFLAICSYDPSVILSE 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_001287282.1 SCP_euk 58..210 CDD:240180 24/138 (17%)
AT4G07820NP_192524.1 CAP_PR-1 29..160 CDD:349400 26/147 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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