DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and Crispld2

DIOPT Version :10

Sequence 1:NP_650053.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001297564.1 Gene:Crispld2 / 78892 MGIID:1926142 Length:495 Species:Mus musculus


Alignment Length:283 Identity:68/283 - (24%)
Similarity:101/283 - (35%) Gaps:90/283 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLTSLLGISLAADYCA-----LP--TCLDKHIACNNKGNFSENCPKDVREVKIEPHHKL------ 59
            ||.:::.:.||...|.     ||  |.|:|.::               :....|||.::      
Mouse     4 LLNNMVLMGLALLVCGVQAFFLPNTTSLEKLLS---------------KYQHAEPHSRVRRAIPM 53

  Fly    60 -----ILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTC--ESLP-DKCRSTE 116
                 ||.|.|:||..|       .|.|..|..|:|.|||...|......|  |..| ...||  
Mouse    54 SDRQEILMLHNKLRGQV-------YPPASNMEHMTWDEELERSAAAWAHRCLWEHGPAGLLRS-- 109

  Fly   117 RFAYAGQNNAV----FQYSGAETEYTDAEIIKEQIENWFAE-RSNASPEILASFPEELPNKA--- 173
                .|||.||    ::..|.            .:::|:.| :....|     :|.|...:.   
Mouse   110 ----IGQNLAVHWGRYRSPGF------------HVQSWYDEVKDYTYP-----YPHECTPRCRER 153

  Fly   174 -----VTKFTIAVAEKNTHVGCAAVRFSRD-------FYNHFVLTCNFA-TSNIVGQPVYTPGEK 225
                 .|.:|..|......:|| ||...|:       :.|...|.||:: ..|.:|:..|..| :
Mouse   154 CSGPMCTHYTQMVWATTNKIGC-AVHTCRNMNVWGDTWENAVYLVCNYSPKGNWIGEAPYKHG-R 216

  Fly   226 ATTGCKNRYGAAYDYPNLCYAKE 248
            ..:.|.:.||... ..|||:..|
Mouse   217 PCSECPSSYGGGC-LNNLCHRAE 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_650053.1 CAP_euk 57..210 CDD:349399 44/186 (24%)
Crispld2NP_001297564.1 CAP 56..201 CDD:412178 44/175 (25%)
LCCL 284..368 CDD:128866
LCCL 387..486 CDD:427521
Blue background indicates that the domain is not in the aligned region.

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