DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scpr-C and Glipr1l1

DIOPT Version :10

Sequence 1:NP_650053.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_081294.1 Gene:Glipr1l1 / 69286 MGIID:1916536 Length:236 Species:Mus musculus


Alignment Length:258 Identity:59/258 - (22%)
Similarity:90/258 - (34%) Gaps:78/258 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAIKS---------LILLTSLLGISLAADYCALPTCLDKHIACNNKGNFSENCPKDVREVKIEPH 56
            ||:|.         |.|:.|.|..:...|...:||..|               ||.:        
Mouse     1 MALKKKLNFLWTLVLYLIASRLPKAFGKDLPRVPTITD---------------PKFI-------- 42

  Fly    57 HKLILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKC-----RSTE 116
             ...||:.||||..|.       |.|..|.::.|.::|:.||....:.|:...:.|     ...|
Mouse    43 -DAFLNIHNELRRKVQ-------PPAADMNQLFWDQQLAKLAKAWTRECKLAHNPCIKQRYECLE 99

  Fly   117 RFAYAGQNNAVFQYSG-AETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNKAVTKFTIA 180
            .:.:.|:|    .|.| .||:..|..|      ||:.|..      ..:|.....::....:|..
Mouse   100 DYDFIGEN----IYLGRIETQPEDVVI------NWYNESK------YFNFDFNTCSEMCGHYTQV 148

  Fly   181 VAEKNTHVGCAAVR------FSRDFYNHFVLTCNFA-TSNIVGQPVYTPGEKAT----TGCKN 232
            |..|...:|||...      ||...:     .||:: ..|.:|...||.|:..:    ..|:|
Mouse   149 VWAKTVKIGCAVSNCPNLKGFSAGLF-----VCNYSPAGNFIGFRPYTRGDSCSMCGQKTCEN 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_650053.1 CAP_euk 57..210 CDD:349399 39/164 (24%)
Glipr1l1NP_081294.1 CAP_GLIPR1-like 40..182 CDD:349404 40/178 (22%)

Return to query results.
Submit another query.