DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and Glipr1l3

DIOPT Version :9

Sequence 1:NP_001287282.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001360960.1 Gene:Glipr1l3 / 544736 MGIID:3620621 Length:236 Species:Mus musculus


Alignment Length:261 Identity:58/261 - (22%)
Similarity:97/261 - (37%) Gaps:84/261 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAIK---------SLILLTSLLGISLAADYCALPTCLDKHIACNNKGNFSENCPKDVREVKIEPH 56
            ||:|         :|.|:.:.|..:...|...:|:.||               ||.:        
Mouse     1 MALKKKLNFLWTLALYLIATRLPKAFGNDLPRVPSILD---------------PKFI-------- 42

  Fly    57 HKLILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTE----- 116
             ...||:.||||..|.       |.|..|.::.|.::|:.||....:.|:...:.|.|.:     
Mouse    43 -DAFLNIHNELRRKVQ-------PPAADMNQVIWDQKLAKLAKAWTRECKLGHNPCTSKQYGCLL 99

  Fly   117 RFAYAGQNNAVFQYSG-AETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNKAVTKFTIA 180
            .:.:.|:|    .|.| .||:..|.      :.||:.|.::      .:|.:...:|....:|..
Mouse   100 DYDFIGEN----IYLGEIETQPEDV------VNNWYNENTD------YNFVDNTCSKICRNYTQL 148

  Fly   181 VAEKNTHVGCAA------VRFSRDFYNHFVLTCNFA-TSNIV-------GQPVYTPGEKATTGCK 231
            |..|...:|||.      .|:|...:     .||:: |.|.:       |.|....|::.   |:
Mouse   149 VWAKTFKIGCAVSNCPNLTRYSAGLF-----VCNYSPTGNFLDFRPYRKGDPCSMCGQRK---CE 205

  Fly   232 N 232
            |
Mouse   206 N 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_001287282.1 SCP_euk 58..210 CDD:240180 39/163 (24%)
Glipr1l3NP_001360960.1 CAP 40..182 CDD:381818 40/178 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167841385
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 75 1.000 Inparanoid score I5254
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.900

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