DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and crisp1.7

DIOPT Version :9

Sequence 1:NP_001287282.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_989314.1 Gene:crisp1.7 / 394939 XenbaseID:XB-GENE-5779195 Length:244 Species:Xenopus tropicalis


Alignment Length:198 Identity:42/198 - (21%)
Similarity:59/198 - (29%) Gaps:52/198 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 ILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAYAGQN 124
            |:::.|..|.:..       |.|..|.||||..|..:.|.....||.                  
 Frog    37 IVDIHNAYRRSAN-------PTASNMLKMSWSIEAENNAKNWATTCN------------------ 76

  Fly   125 NAVFQYSGAETEYTDAEIIKEQIENWFAERSNAS-PEILASFPEELPN-------KAV----TKF 177
                ||.........|.|...  ||.|.....|| .|::.|...|..|       |||    ..:
 Frog    77 ----QYHSQPAARQIANITCG--ENLFMSSYPASWEEVIQSLHSEYDNFEYGVGAKAVGLVIGHY 135

  Fly   178 TIAVAEKNTHVGCAAVRFSRDFYN-HFVLTCNFATSNIVGQPVYTPGEKATTGCKNRYGAAYDYP 241
            |..:..|:..:||.......|... .:...|.:..:......:..| .|:...|.       |.|
 Frog   136 TQVMWYKSYRIGCYCTECPNDGVRLKYYYVCQYYPAGNYADRINYP-YKSGPSCA-------DCP 192

  Fly   242 NLC 244
            :.|
 Frog   193 DAC 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_001287282.1 SCP_euk 58..210 CDD:240180 36/162 (22%)
crisp1.7NP_989314.1 CAP_CRISP 32..171 CDD:349402 36/164 (22%)
Crisp 188..243 CDD:369954 4/15 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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