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Protein Alignment scpr-C and glipr1b
DIOPT Version :9
Sequence 1: | NP_001287282.1 |
Gene: | scpr-C / 41348 |
FlyBaseID: | FBgn0037879 |
Length: | 262 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005159058.1 |
Gene: | glipr1b / 393547 |
ZFINID: | ZDB-GENE-040426-1459 |
Length: | 255 |
Species: | Danio rerio |
Alignment Length: | 186 |
Identity: | 33/186 - (17%) |
Similarity: | 59/186 - (31%) |
Gaps: | 70/186 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 89 SWCEELSHLALLNVKTCESLPDKCRSTE----------RFAYAGQN-------------NAVFQY 130
||.:||: |........|:.:. .|.:.|:| |||.::
Zfish 67 SWDKELA-------KGARDRARHCKGSHYPSLGHFGHPLFGWMGENIWLGSPFSAFSVENAVHRW 124
Fly 131 SGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNKAVTKFTIAVAEKNTHVGCAAVRF 195
|. |..::.::|....:...:.:.:.: |.| .:|||....
Zfish 125 SK---------------EGAYSVKNNNCSRLCGHYAQLMWS---TSF---------KMGCAVNVC 162
Fly 196 SR---DFYNH---FVLTCNFA-TSNIVGQPVYTPGEKATTGCKNRYGAAYDYPNLC 244
|: :|..| .:..||:. |..:.|...|. ....:|| |:.....|:|
Zfish 163 SKGIENFSTHPESTIFVCNYGDTGQVHGVTPYM--AMGCSGC----GSEICRDNVC 212
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
scpr-C | NP_001287282.1 |
SCP_euk |
58..210 |
CDD:240180 |
25/149 (17%) |
glipr1b | XP_005159058.1 |
SCP |
32..185 |
CDD:294090 |
25/151 (17%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG2340 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1528782at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.820 |
|
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