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Protein Alignment scpr-C and Glipr1l2
DIOPT Version :9
Sequence 1: | NP_001287282.1 |
Gene: | scpr-C / 41348 |
FlyBaseID: | FBgn0037879 |
Length: | 262 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_002729829.4 |
Gene: | Glipr1l2 / 366890 |
RGDID: | 1310205 |
Length: | 228 |
Species: | Rattus norvegicus |
Alignment Length: | 187 |
Identity: | 42/187 - (22%) |
Similarity: | 72/187 - (38%) |
Gaps: | 43/187 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 61 LNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTC----ESLPDKCRSTER-FAY 120
:||.||||..| .|..|.:..|:|...||..|....|.| .:..||...:.. |..
Rat 57 VNLHNELRGTV-------FPPGVNLRFMTWDVALSRTARAWGKKCVFERNTHLDKVHESHPVFTD 114
Fly 121 AGQNNAVFQYSGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEE--LPNKAVTKFTIAVAE 183
.|:| .:.|.|.::|....|: :|..||.: .::..: :.::..:.:...|.:
Rat 115 IGEN----MWVGPEKDFTATNAIR----SWHEERKS------YNYVNDTCIEDEDCSHYIQLVWD 165
Fly 184 KNTHVGCA--------AVRFSRDFYNHFVLTCNFATSNIVGQPVYTPGEKATTGCKN 232
.:..|||| |:.::..| .||:|....:.:..|..|:..:. |.|
Rat 166 HSYKVGCAVTPCAKVGAITYAALF------ICNYAPGGTLTRRPYQAGQFCSR-CTN 215
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
scpr-C | NP_001287282.1 |
SCP_euk |
58..210 |
CDD:240180 |
37/163 (23%) |
Glipr1l2 | XP_002729829.4 |
CAP |
51..197 |
CDD:412178 |
38/166 (23%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C166344795 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
1 |
1.050 |
75 |
1.000 |
Inparanoid score |
I5171 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1528782at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.900 |
|
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