DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and Glipr1l2

DIOPT Version :10

Sequence 1:NP_650053.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001419286.1 Gene:Glipr1l2 / 366890 RGDID:1310205 Length:318 Species:Rattus norvegicus


Alignment Length:187 Identity:42/187 - (22%)
Similarity:72/187 - (38%) Gaps:43/187 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 LNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTC----ESLPDKCRSTER-FAY 120
            :||.||||..|       .|..|.:..|:|...||..|....|.|    .:..||...:.. |..
  Rat    57 VNLHNELRGTV-------FPPGVNLRFMTWDVALSRTARAWGKKCVFERNTHLDKVHESHPVFTD 114

  Fly   121 AGQNNAVFQYSGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEE--LPNKAVTKFTIAVAE 183
            .|:|    .:.|.|.::|....|:    :|..||.:      .::..:  :.::..:.:...|.:
  Rat   115 IGEN----MWVGPEKDFTATNAIR----SWHEERKS------YNYVNDTCIEDEDCSHYIQLVWD 165

  Fly   184 KNTHVGCA--------AVRFSRDFYNHFVLTCNFATSNIVGQPVYTPGEKATTGCKN 232
            .:..||||        |:.::..|      .||:|....:.:..|..|:..:. |.|
  Rat   166 HSYKVGCAVTPCAKVGAITYAALF------ICNYAPGGTLTRRPYQAGQFCSR-CTN 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_650053.1 CAP_euk 57..210 CDD:349399 37/163 (23%)
Glipr1l2NP_001419286.1 CAP 51..197 CDD:412178 38/166 (23%)

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