DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and Pi16

DIOPT Version :10

Sequence 1:NP_650053.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001163952.1 Gene:Pi16 / 294312 RGDID:1304760 Length:483 Species:Rattus norvegicus


Alignment Length:206 Identity:44/206 - (21%)
Similarity:69/206 - (33%) Gaps:68/206 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 EPHHKLILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKC---RST 115
            |...:.::.|.|..|..|:       |.|..|.:|.|.:||:..|       ::...||   .:.
  Rat    36 EDEKQTMVELHNHYRAQVS-------PPASDMLQMRWDDELAAFA-------KAYAQKCVWGHNK 86

  Fly   116 ERFAYAGQNNAVFQYSGAETEYTDAEIIKEQIENWFAER-----SNASPEILASFPEELPNKAVT 175
            || ...|:|.......|.:        :...:.||..|.     |.|:.:         |.:...
  Rat    87 ER-GRRGENLFAITDEGMD--------VPLAVGNWHEEHEYYNLSTATCD---------PGQMCG 133

  Fly   176 KFTIAVAEKNTHVGCAAVRFSRDFYNHF-------------VLTCNF-ATSNIVGQPVY---TPG 223
            .:|..|..|...:||.         :||             :|.||: ...|:.|:..|   ||.
  Rat   134 HYTQVVWSKTERIGCG---------SHFCETLQGVEEANIHLLVCNYEPPGNVKGRKPYQEGTPC 189

  Fly   224 EKATTG--CKN 232
            .:...|  |.|
  Rat   190 SQCPLGYSCVN 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_650053.1 CAP_euk 57..210 CDD:349399 35/174 (20%)
Pi16NP_001163952.1 CAP_PI16_HrTT-1 39..172 CDD:349405 35/173 (20%)
PHA03247 <205..459 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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