DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and CLEC18C

DIOPT Version :9

Sequence 1:NP_001287282.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_775890.2 Gene:CLEC18C / 283971 HGNCID:28538 Length:446 Species:Homo sapiens


Alignment Length:193 Identity:46/193 - (23%)
Similarity:67/193 - (34%) Gaps:51/193 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LILLTSLLGISLAADYCALPTCLDKHI----ACNNKGNFSENCPKDVREVKIEPHHKLILNLFNE 66
            |.:|.:|||.:.|..:   |..|.:..    |.|.|.:|                  |:|:|.|.
Human    14 LAVLLALLGTAWAEVW---PPQLQEQAPMAGALNRKESF------------------LLLSLHNR 57

  Fly    67 LRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCE-SLPDKCRSTERFAYAGQNNAVFQY 130
            ||:.|.       |.|..|.::.|.:.|:.||......|. ..|.......|....|.|..:...
Human    58 LRSWVQ-------PPAADMRRLDWSDSLAQLAQARAALCGIPTPSLASGLWRTLQVGWNMQLLPA 115

  Fly   131 SGAETEYTDAEIIKEQIENWFAE---RSNASPEILASFPEELPNKAVTKFTIAVAEKNTHVGC 190
            ..|.        ..|.:..||||   .|:|:.|...       |...|.:|..|...::.:||
Human   116 GLAS--------FVEVVSLWFAEGQRYSHAAGECAR-------NATCTHYTQLVWATSSQLGC 163

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_001287282.1 SCP_euk 58..210 CDD:240180 34/137 (25%)
CLEC18CNP_775890.2 SCP_euk 50..183 CDD:240180 34/136 (25%)
CLECT 310..434 CDD:153057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165151086
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.750

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