DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and D2062.1

DIOPT Version :9

Sequence 1:NP_001287282.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001293506.1 Gene:D2062.1 / 24104374 WormBaseID:WBGene00017055 Length:204 Species:Caenorhabditis elegans


Alignment Length:190 Identity:41/190 - (21%)
Similarity:66/190 - (34%) Gaps:49/190 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 NCPKDVREVKIEPHHKLILNLFNELRNNVAGGKIEGLPKAVR-----MAKMSWCEELSHLALLNV 102
            |.|| ::|:.:..|     ||:...         .|.|..|.     :|...|.:|::....:  
 Worm    43 NIPK-LKELIVAYH-----NLYRSK---------HGAPPLVADPVMDVAAKRWADEMAKSGWI-- 90

  Fly   103 KTCESLPDKCRSTERFAYAGQNNAVFQYSGA---ETEYTDAEIIKEQIENWFAERSNASPEILAS 164
                       |.|:....|:|.|:|..||.   ......|.:....||....:.|:..||:|  
 Worm    91 -----------SHEKPRKYGENVAMFCQSGCWPLPQTLAQAMVHLFYIEGIGYDYSSFKPELL-- 142

  Fly   165 FPEELPNKAVTKFTIAV--AEKNTHVGCAAVRFSRDFYNHFVLTC-NF-ATSNIVGQPVY 220
                   |....||..|  :.:...||.:..:.|:..|...:..| .| ...|::.|..|
 Worm   143 -------KENGHFTQIVWKSSRKIGVGISIGKSSQPPYIPTMFHCVKFDPPGNVLAQQYY 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_001287282.1 SCP_euk 58..210 CDD:240180 33/163 (20%)
D2062.1NP_001293506.1 CAP_GAPR1-like 46..189 CDD:349401 36/179 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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