DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and scl-18

DIOPT Version :9

Sequence 1:NP_001287282.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_502228.2 Gene:scl-18 / 188436 WormBaseID:WBGene00011724 Length:225 Species:Caenorhabditis elegans


Alignment Length:238 Identity:45/238 - (18%)
Similarity:71/238 - (29%) Gaps:90/238 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 FSENCPKDVREVKIEPHHKLILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKT 104
            ||....:||.:     ||       |.:|:.:|.|..        :.|                 
 Worm    33 FSRKGQQDVLD-----HH-------NNIRSQLAFGNF--------VTK----------------- 60

  Fly   105 CESLPDKCRSTERFAYAGQN------NAVFQ---YSGAETEYTDAEIIKEQIENWF-------AE 153
                    |.|:|  .||.|      ||..:   ||.|:...:....|.:..||.|       .:
 Worm    61 --------RHTKR--AAGSNIKKFVWNATLERSAYSFAQKNPSQHSFIPDIGENLFWHWSTRPGD 115

  Fly   154 RSNASPEILASFPEELPNK--------------AVTKFTIAVAEKNTHVGCAAVRFSRDFYNH-- 202
            .:...|....|:.:|...|              .|...|..|......:|||...| ::.:..  
 Worm   116 FNKYGPMAALSWIKEFREKFWDSNILTNDLFGSGVGHATQMVWADTYQMGCAVSHF-KEIHKRTG 179

  Fly   203 -----FVLTCNF-ATSNIVGQPVYTPGEKA----TTGCKNRYG 235
                 ..:.|:: ...|.:.:|:|..|...    :..|..|.|
 Worm   180 RPITKICVVCHYWPKGNYLNEPIYLEGPPCSKCESKKCDKRTG 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_001287282.1 SCP_euk 58..210 CDD:240180 32/189 (17%)
scl-18NP_502228.2 SCP 37..193 CDD:214553 36/203 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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