DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and scl-15

DIOPT Version :10

Sequence 1:NP_650053.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_494496.1 Gene:scl-15 / 184099 WormBaseID:WBGene00017183 Length:207 Species:Caenorhabditis elegans


Alignment Length:254 Identity:53/254 - (20%)
Similarity:91/254 - (35%) Gaps:71/254 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IKSLILLTSLLGISLAADYCALPTCLDKHIACNNKGNFSENCPKDVREVKIEPHHKLILNLFNEL 67
            :::||||..:..:|:                   .|.||            :...|.|::..|.|
 Worm     1 MRALILLAVVASVSV-------------------YGQFS------------KAGQKAIVDAHNTL 34

  Fly    68 RNNVAGG-----KIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAYAGQNNAV 127
            |:::|.|     |....|.: .:.||.|...::..|.....||.:...|.:..|        |..
 Worm    35 RSSIAKGTYVANKTRKEPGS-NILKMKWDPTIAKSAQAYANTCPTGHGKSKYGE--------NLY 90

  Fly   128 FQYSGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNK---AVTKFTIAVAEK----- 184
            :::|||        :|| .|:::....|.|.......:..: .||   |:.|..|..|.:     
 Worm    91 WRWSGA--------VIK-SIDDYGVRASGAWASEFQKYGWK-TNKLDSALFKTGIGHATQMAWAS 145

  Fly   185 NTHVGCAAVRFSRDFYNHF--VLTCNF-ATSNIVGQPVYTPGE-----KATTGCKNRYG 235
            ...:||.......|....:  .:.|.: |..|::...:||.|:     .|.|.|:...|
 Worm   146 TGSIGCGVKNCGMDKNKMYKVAVVCQYSARGNMINNNIYTAGKTCSACPAKTKCEKATG 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_650053.1 CAP_euk 57..210 CDD:349399 36/168 (21%)
scl-15NP_494496.1 SCP 22..173 CDD:214553 36/169 (21%)

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