DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and scl-6

DIOPT Version :9

Sequence 1:NP_001287282.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_502508.1 Gene:scl-6 / 183343 WormBaseID:WBGene00008028 Length:209 Species:Caenorhabditis elegans


Alignment Length:246 Identity:55/246 - (22%)
Similarity:81/246 - (32%) Gaps:60/246 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LILLTSLLGISLAADYCALPTCLDKHIACNNKGNFSENCPKDVREVKIEPHHKLILNLFNELRNN 70
            |:..||||.:.:.|:                   ||.:.            .:.|::|.|..|:.
 Worm     5 LVFATSLLIVLVDAE-------------------FSSST------------QQFIVDLHNSFRSK 38

  Fly    71 VAGG--KIEGL--PKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAYAGQNNAVFQ-- 129
            :|.|  .|.|.  |....:.||||...|:..|.....||.:.....:.|....|....:|...  
 Worm    39 LATGTYSINGTLKPAGSNIRKMSWDSTLATSAQTYANTCPTGFSNTQGTGENLYWRTTSANISGL 103

  Fly   130 --YSGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNKAVTKFTIAVAEKNTHVGCAA 192
              |.||      |.:..||....:...:|       .|.:||.:..|...|.....|...|||..
 Worm   104 DIYGGA------ASVSWEQEFQKYGWATN-------YFSQELFDTGVGNGTQMAWAKTNLVGCGV 155

  Fly   193 VRFSRDF--YNHFVLTCNF-ATSNIVGQPVYTPGEKAT-----TGCKNRYG 235
            ....:|.  .|...:.|:: .....|.|.:||.|...:     |.|....|
 Worm   156 KNCGKDSTGLNKVAVVCHYKPLGRYVDQMIYTAGFTCSQCPTGTSCDQTTG 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_001287282.1 SCP_euk 58..210 CDD:240180 39/162 (24%)
scl-6NP_502508.1 SCP 23..176 CDD:214553 39/177 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.970

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