DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and scl-23

DIOPT Version :9

Sequence 1:NP_001287282.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_499859.3 Gene:scl-23 / 182028 WormBaseID:WBGene00015246 Length:330 Species:Caenorhabditis elegans


Alignment Length:302 Identity:63/302 - (20%)
Similarity:100/302 - (33%) Gaps:94/302 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAIKSLILLTSLLGIS-------------------LAADYCALPTCLDKHIACNNKGNFSENCPK 46
            |.:|.:.:..:::.:|                   :|..||.|                  |.|.
 Worm    73 MRLKGVFIAVTVITLSYNILAASTPRPSRFSVITKMAPAYCRL------------------NLPA 119

  Fly    47 DVREVKIEPHHKLILNLFNELRNNVAGGKI----EGLPKAVRMAKMSWCEELSHLALLNVKTCES 107
            .::        .|||:..||:|:.||.|:.    :.||.|..|.|:.|..||...|....:.|..
 Worm   120 RLQ--------NLILDKHNEIRSQVALGQYAVDDDYLPPADNMVKLDWDCELELEAQQRAQQCNL 176

  Fly   108 LP----------DKCRSTERFAYAGQNNAVFQYSGA---ETEYTDAEIIKEQIENW----FAERS 155
            ..          |:.|....|.:...:.  ...|||   ..:....||....|:|.    :..|.
 Worm   177 QKENSGRQMNGWDEVRGENAFYFRTTDG--LDVSGAVLKGIQRMGDEIAIAGIKNLKLSRYDSRI 239

  Fly   156 NASPEILASFPEELPNKAVTKFTIAVAEKNTHVGCAAVR-FSRDFYNHFVLTCN-FATSNI---- 214
            ..:.:||.        |...|...||.|      |.|.: .|.|...:.|..|. :.|.|:    
 Worm   240 GHATQILW--------KETRKLGCAVQE------CPARQDGSLDGQKYNVAVCKYYPTGNVFKSS 290

  Fly   215 VGQPVYTPGEKATTGCKNRYGAAYDYPN--LCYAKEIYDNEK 254
            ....:|:.|:.|:...:..:|.    |:  ||.|....:..|
 Worm   291 TPTSIYSVGDVASACSEGTFGD----PSTGLCVAATWQEGSK 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_001287282.1 SCP_euk 58..210 CDD:240180 43/174 (25%)
scl-23NP_499859.3 CAP_euk 122..281 CDD:349399 43/182 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157351
Domainoid 1 1.000 41 1.000 Domainoid score I8510
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 71 1.000 Inparanoid score I3895
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.900

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