DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and scl-5

DIOPT Version :10

Sequence 1:NP_650053.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_502506.1 Gene:scl-5 / 178253 WormBaseID:WBGene00008027 Length:208 Species:Caenorhabditis elegans


Alignment Length:257 Identity:56/257 - (21%)
Similarity:91/257 - (35%) Gaps:81/257 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SLILLTSLLGISLAADYCALPTCLDKHIACNNKGNFSENCPKDVREVKIEPHHKLILNLFNELRN 69
            |::|||:|         ||           .....||.|            ....|||:.|.||:
 Worm     4 SILLLTAL---------CA-----------GAYAQFSAN------------GQAAILNVHNTLRS 36

  Fly    70 NVAGG----KIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAYAGQNNAVFQY 130
            .:|.|    |....|.|..|.||.|...::       .:.::..:|| .|.....||....::.|
 Worm    37 RIAKGTYVAKGTAKPAASDMLKMKWDATVA-------ASAQAYANKC-PTGHSGAAGLGENLYWY 93

  Fly   131 SGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNKAVTKFTIAVAEKNT---H----- 187
                  :|.|.|  ..|:.:.|..|       |::.:|..:...:..|::::..||   |     
 Worm    94 ------WTSATI--TNIDQFGATGS-------AAWEKEFQDYGWSSNTLSMSLFNTGIGHATQMA 143

  Fly   188 ------VGCAAVRFSRDF--YNHFVLTCNF-ATSNIVGQPVYTPGEKAT-----TGCKNRYG 235
                  :||......:|.  :|...:.|.: ...|.:.|.:||.|...:     |.|:...|
 Worm   144 WAKTNLIGCGVKNCGKDTNGFNKVTVVCQYKPQGNYLNQNIYTSGTTCSKCPSGTSCEAATG 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_650053.1 CAP_euk 57..210 CDD:349399 38/173 (22%)
scl-5NP_502506.1 SCP 22..175 CDD:214553 39/187 (21%)

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