DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and lon-1

DIOPT Version :10

Sequence 1:NP_650053.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_498166.1 Gene:lon-1 / 175753 WormBaseID:WBGene00003055 Length:312 Species:Caenorhabditis elegans


Alignment Length:317 Identity:72/317 - (22%)
Similarity:98/317 - (30%) Gaps:106/317 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLTSLLG----ISLAADYCALPTCLDKHIACNNKGNFSENCPKDV-------REVKIE------P 55
            |||:|:.    ||:|.:   :|     |.....:...|.:.|.|:       .|||.|      |
 Worm     4 LLTALIALLAPISVAYN---VP-----HGFLTGEAVTSHSGPNDLDGELPATDEVKREKRGYFFP 60

  Fly    56 HH-------------------KLILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLN 101
            .|                   |.|.:..|..|..|         .|..|..:.|.:||:..|..:
 Worm    61 SHFQSDSGLLSRSEHPNEYLKKWITHEHNRYRRMV---------PASDMNMLYWSDELAASAQRH 116

  Fly   102 VKTCESLPDKCRSTERFAYAGQNNAVFQYSGAETEYTDAEIIKEQIENWFAERSNASPEILASFP 166
            ..||:....:.|..     .|:|.....||    .|:||      |..||.|..|         |
 Worm   117 ADTCDFRHSRGRIN-----VGENIWAAPYS----NYSDA------ISIWFNEVHN---------P 157

  Fly   167 EELPNKAVT----KFTIAVAEKNTHVGCAAVR-------FSRDFYNHFVLTCNF----------A 210
            ....|.|..    .:...|..|...|||...|       :.|...|.||  |::          |
 Worm   158 RCGCNHAYKHCCGHYVQVVWAKTNLVGCGFSRCRDVQGVWGRGHRNVFV--CHYNPQGNTVFVTA 220

  Fly   211 TSNIVGQPVYTPGEKATTGCKN-RYGAAYDYPNLCYAKEIYD-----NEKVIENTQT 261
            ...:...|.:|........|.| ...|...|..|||..:.|:     .|....:|.|
 Worm   221 RGQLYAMPAFTWASGDNGKCSNCPANAPACYQGLCYMPKNYEAPTTTTESTTTSTTT 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_650053.1 CAP_euk 57..210 CDD:349399 41/192 (21%)
lon-1NP_498166.1 SCP 81..211 CDD:214553 40/164 (24%)

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