DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scpr-C and GLIPR2

DIOPT Version :9

Sequence 1:NP_001287282.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001273942.1 Gene:GLIPR2 / 152007 HGNCID:18007 Length:169 Species:Homo sapiens


Alignment Length:170 Identity:38/170 - (22%)
Similarity:59/170 - (34%) Gaps:46/170 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 HKLILNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSH------LALLNVKTCESLPDKCRST 115
            |..:|...||.|..      .|:|      .:..|:.|:.      .||.:.:..:..|:..|  
Human    25 HNEVLKAHNEYRQK------HGVP------PLKLCKNLNREAQQYSEALASTRILKHSPESSR-- 75

  Fly   116 ERFAYAGQNNAVFQYSGAETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNKAVTKFTIA 180
               ...|:|.|...|.         :..||..:.|::|..|      .:|.:.........|| |
Human    76 ---GQCGENLAWASYD---------QTGKEVADRWYSEIKN------YNFQQPGFTSGTGHFT-A 121

  Fly   181 VAEKNTH---VGCAAVRFSRDFYNHFVLTCNFATSNIVGQ 217
            :..|||.   ||.|    |....:.||:...|...|:|.:
Human   122 MVWKNTKKMGVGKA----SASDGSSFVVARYFPAGNVVNE 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_001287282.1 SCP_euk 58..210 CDD:240180 34/160 (21%)
GLIPR2NP_001273942.1 SCP_GAPR-1_like 23..154 CDD:240182 36/165 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.