DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scpr-C and LOC1271753

DIOPT Version :10

Sequence 1:NP_650053.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_310606.6 Gene:LOC1271753 / 1271753 VectorBaseID:AGAMI1_002439 Length:322 Species:Anopheles gambiae


Alignment Length:258 Identity:80/258 - (31%)
Similarity:120/258 - (46%) Gaps:35/258 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LILLTSLLG--ISLAADYCALPTCL--DKHIACNNKGNFSENCP-KDVREVKIEPHHK-LILNLF 64
            |:||..|.|  ...:..||....|.  |.|:.|..:..|.::|. :..:.|.:.|..| :||...
Mosquito    80 LLLLLLLPGRRSQTSNYYCQRSMCPTGDAHVGCYAELPFGKSCQGQKPQLVPMTPERKAMILQQH 144

  Fly    65 NELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCRSTERFAYAGQNNAVFQ 129
            |..|..:|.|.:.|...|..|.::.|.:||.:||.:|.::|....|.||:|..|..||||.|:.:
Mosquito   145 NRQRQRLALGTLPGYGPAYHMPQLYWDDELQYLAEVNARSCVYAHDHCRNTYSFPRAGQNIAIIR 209

  Fly   130 YSG----AETEYTDAEIIKEQIENWFAERSNASPEILASFPEELPNKAV----TKFTIAVAEKNT 186
            :.|    .|:.||..      |::|:.|...|:     :|.::.|...|    ..||..|.::..
Mosquito   210 HFGLNLTKESVYTYI------IDHWYNEYPLAT-----TFVDQYPVNYVGPEFAHFTQIVNDRAV 263

  Fly   187 HVGCAAVRFSRDFYNHFV-----LTCNFATSNIVGQPVYTPGEKATTGCKNRYGAAYDYPNLC 244
            .:||..|  |.:.||.:|     |.||:..||::|...||.|..| .||..  |.:..||.||
Mosquito   264 RMGCGMV--SWETYNGYVWTNDYLVCNYGYSNVIGDRSYTKGPVA-AGCTT--GRSVVYPGLC 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_650053.1 CAP_euk 57..210 CDD:349399 51/166 (31%)
LOC1271753XP_310606.6 None

Return to query results.
Submit another query.