DRSC/TRiP Functional Genomics Resources

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Protein Alignment scpr-C and crispld2

DIOPT Version :10

Sequence 1:NP_650053.1 Gene:scpr-C / 41348 FlyBaseID:FBgn0037879 Length:262 Species:Drosophila melanogaster
Sequence 2:XP_003199065.1 Gene:crispld2 / 100535149 ZFINID:ZDB-GENE-130131-1 Length:508 Species:Danio rerio


Alignment Length:274 Identity:71/274 - (25%)
Similarity:103/274 - (37%) Gaps:51/274 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AIKSLILLTSLLGISLAADYCALPTCLD-KHIACNNKGNFSENCPKDVREVK----IE-PHHKLI 60
            |:.|:.||  .||:||||. ..||..|: :.:....:.....|..|....|:    || ...:.|
Zfish     3 ALVSIALL--FLGVSLAAS-LFLPDSLELRQLMQRYQEELEPNSTKPDAPVRTRRAIEWSDREEI 64

  Fly    61 LNLFNELRNNVAGGKIEGLPKAVRMAKMSWCEELSHLALLNVKTCESLPDKCR----STERFAYA 121
            |.|.|:||..|       .|.|..|..|.|.:||.       ::..|..::|:    ..:.....
Zfish    65 LKLHNKLRGEV-------YPTASNMEYMIWDDELE-------RSATSWAEQCQWEHGPQDLLMSI 115

  Fly   122 GQNNAVFQYSGAETEYTDAEIIKEQIENWFAE-RSNASP---EILASFPEELPNKAVTKFTIAVA 182
            |||.||.........|        .::.|:.| :....|   |.....||.......|.:|..|.
Zfish   116 GQNLAVHWGRYRSPAY--------HVQAWYDEVKDYTYPYPHECNPWCPERCSGPMCTHYTQLVW 172

  Fly   183 EKNTHVGCAAVRFSR------DFYNHFVLTCNFA-TSNIVGQPVYTPGEKATTGCKNRYGAAYDY 240
            .....||||.....|      .:.|...|.||:: ..|.:|:..|..| :..:.|...||... .
Zfish   173 ATTNRVGCAVHVCPRMNVWGEIWENAVYLVCNYSPKGNWIGEAPYQHG-RPCSQCPPSYGGVC-R 235

  Fly   241 PNLCYAKEIYDNEK 254
            .||||.:   |:|:
Zfish   236 DNLCYKR---DSER 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scpr-CNP_650053.1 CAP_euk 57..210 CDD:349399 40/166 (24%)
crispld2XP_003199065.1 CAP_CRISPLD2 61..206 CDD:349410 40/166 (24%)
LCCL 299..382 CDD:128866
LCCL 402..495 CDD:427521
Blue background indicates that the domain is not in the aligned region.

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