DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL3 and RPL3

DIOPT Version :10

Sequence 1:NP_524316.1 Gene:RpL3 / 41347 FlyBaseID:FBgn0020910 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_014706.1 Gene:RPL3 / 854229 SGDID:S000005589 Length:387 Species:Saccharomyces cerevisiae


Alignment Length:395 Identity:256/395 - (64%)
Similarity:310/395 - (78%) Gaps:9/395 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
            |||||:.|||||.:.|.|:||:|..|.:||||||||.||||.||.|:|||||||.|||:.|||||
Yeast     1 MSHRKYEAPRHGHLGFLPRKRAASIRARVKAFPKDDRSKPVALTSFLGYKAGMTTIVRDLDRPGS 65

  Fly    66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAF 130
            |.:|:||||||||::|||::|||.|||:|||.|||:|..|||:|||:|.:|||||||||||||||
Yeast    66 KFHKREVVEAVTVVDTPPVVVVGVVGYVETPRGLRSLTTVWAEHLSDEVKRRFYKNWYKSKKKAF 130

  Fly   131 TKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVK 195
            ||.|.|:..|  ...||.:..::.:|..|:||:.|:|||.....|||||:.|||||||||.:||.
Yeast   131 TKYSAKYAQD--GAGIERELARIKKYASVVRVLVHTQIRKTPLAQKKAHLAEIQLNGGSISEKVD 193

  Fly   196 WAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPS 260
            |||||.||.:.|.:||.|:||||.:.||||.||:|||.||.|||||||||:|||||||||||||:
Yeast   194 WAREHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKTHRGLRKVACIGAWHPA 258

  Fly   261 RVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGE 325
            .|..:||||||:|||.||.||.||||:|.|    |.:.   |.:|.:|.|.|:|||||||.||||
Yeast   259 HVMWSVARAGQRGYHSRTSINHKIYRVGKG----DDEA---NGATSFDRTKKTITPMGGFVHYGE 316

  Fly   326 VNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMG 390
            :.|||:|:|||..|::|||:||||||..:|.|.|||::.||:|||:||.|.|||||||:|.||||
Yeast   317 IKNDFIMVKGCIPGNRKRIVTLRKSLYTNTSRKALEEVSLKWIDTASKFGKGRFQTPAEKHAFMG 381

  Fly   391 PLKKD 395
            .||||
Yeast   382 TLKKD 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL3NP_524316.1 PTZ00103 1..400 CDD:240267 256/395 (65%)
RPL3NP_014706.1 PTZ00103 1..387 CDD:240267 256/395 (65%)

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