DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL3 and Rpl3l

DIOPT Version :9

Sequence 1:NP_524316.1 Gene:RpL3 / 41347 FlyBaseID:FBgn0020910 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001157417.1 Gene:Rpl3l / 66211 MGIID:1913461 Length:407 Species:Mus musculus


Alignment Length:400 Identity:277/400 - (69%)
Similarity:336/400 - (84%) Gaps:0/400 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
            ||||||||||||.:.|.|.|||.|||||||::|:||.|:|||||.|:||||||||.:||..|||.
Mouse     1 MSHRKFSAPRHGHLGFLPHKRSRRHRGKVKSWPRDDPSQPVHLTAFLGYKAGMTHTLREVHRPGL 65

  Fly    66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAF 130
            ||:|:|.|||||::||||::|||.|||:.||.|||:...::|:|||:||||||||:|:|||||||
Mouse    66 KISKREEVEAVTIVETPPLVVVGVVGYVATPRGLRSFKTIFAEHLSDECRRRFYKDWHKSKKKAF 130

  Fly   131 TKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVK 195
            |||.|:|.|..|||.::.||..|.:||||||||.|:|::|:..||||||:||||||||::.:||.
Mouse   131 TKACKRWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLNGGTVAEKVA 195

  Fly   196 WAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPS 260
            |.:..:||.:.|.:||.|.|:||.:.||||:|.|||||||||||||||||||||||||||||||:
Mouse   196 WVQARMEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPA 260

  Fly   261 RVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGE 325
            ||..::|||||||||||||:||||||||.|:|.:|||:::|||||.||:|||||||:||||||||
Mouse   261 RVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKMVRNNASTSYDVTDKSITPLGGFPHYGE 325

  Fly   326 VNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMG 390
            |||||:|:|||..|:|||:||||||||.|..|.|||.|:||||||:||.|||.|||..:|.||||
Mouse   326 VNNDFIMLKGCIAGTKKRVITLRKSLLVHHSRRALENIELKFIDTTSKFGHGCFQTAQEKRAFMG 390

  Fly   391 PLKKDRLKEE 400
            |.||...||:
Mouse   391 PQKKHLEKEK 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL3NP_524316.1 PTZ00103 1..400 CDD:240267 276/398 (69%)
Rpl3lNP_001157417.1 PTZ00103 1..400 CDD:240267 276/398 (69%)
RplC 7..373 CDD:294230 253/365 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842774
Domainoid 1 1.000 609 1.000 Domainoid score I192
eggNOG 1 0.900 - - E1_COG0087
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 652 1.000 Inparanoid score I781
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62184
OrthoDB 1 1.010 - - D362198at33208
OrthoFinder 1 1.000 - - FOG0001847
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100665
Panther 1 1.100 - - O PTHR11363
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1206
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.770

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