DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RpL3 and RPL3

DIOPT Version :9

Sequence 1:NP_524316.1 Gene:RpL3 / 41347 FlyBaseID:FBgn0020910 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_000958.1 Gene:RPL3 / 6122 HGNCID:10332 Length:403 Species:Homo sapiens


Alignment Length:403 Identity:303/403 - (75%)
Similarity:355/403 - (88%) Gaps:1/403 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
            |||||||||||||:.|.|:|||:|||||||:|||||.|||||||.|:||||||||||||.|||||
Human     1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDPSKPVHLTAFLGYKAGMTHIVREVDRPGS 65

  Fly    66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAF 130
            |:||||||||||::|||||:|||.|||:|||.|||....|:|:|:|:||:|||||||:|||||||
Human    66 KVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAF 130

  Fly   131 TKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVK 195
            ||..|||.|:.|||.:|.||..|.:||:|||||||:|:||:..||||||:||||:|||::.:|:.
Human   131 TKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLD 195

  Fly   196 WAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPS 260
            ||||.||:.:.|:.|||||||||.:|||||||:|||||||||||||||||:|||||||||||||:
Human   196 WARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPA 260

  Fly   261 RVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGE 325
            ||:.:||||||||||||||||||||:||.|...||||:|||||||:|||:||||.|:|||.||||
Human   261 RVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGE 325

  Fly   326 VNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMG 390
            |.|||||:|||.:|:|||::|||||||..|||.|||:|.||||||:||.|||||||..:|.||||
Human   326 VTNDFVMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMG 390

  Fly   391 PLKKDRL-KEEAA 402
            ||||||: |||.|
Human   391 PLKKDRIAKEEGA 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL3NP_524316.1 PTZ00103 1..400 CDD:240267 300/399 (75%)
RPL3NP_000958.1 PTZ00103 1..400 CDD:240267 299/398 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37 29/35 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152722
Domainoid 1 1.000 607 1.000 Domainoid score I192
eggNOG 1 0.900 - - E1_COG0087
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H747
Inparanoid 1 1.050 646 1.000 Inparanoid score I802
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62184
OrthoDB 1 1.010 - - D362198at33208
OrthoFinder 1 1.000 - - FOG0001847
OrthoInspector 1 1.000 - - otm41610
orthoMCL 1 0.900 - - OOG6_100665
Panther 1 1.100 - - LDO PTHR11363
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1136
SonicParanoid 1 1.000 - - X1206
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.