DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL3 and Rpl3

DIOPT Version :9

Sequence 1:NP_524316.1 Gene:RpL3 / 41347 FlyBaseID:FBgn0020910 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_038790.2 Gene:Rpl3 / 27367 MGIID:1351605 Length:403 Species:Mus musculus


Alignment Length:403 Identity:303/403 - (75%)
Similarity:356/403 - (88%) Gaps:1/403 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSHRKFSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
            |||||||||||||:.|.|:|||:|||||||:|||||||||||||.|:||||||||||||.|||||
Mouse     1 MSHRKFSAPRHGSLGFLPRKRSSRHRGKVKSFPKDDASKPVHLTAFLGYKAGMTHIVREVDRPGS 65

  Fly    66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAF 130
            |:||||||||||::|||||:|||.|||:|||.|||....|:|:|:|:||:|||||||:|||||||
Mouse    66 KVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFKTVFAEHISDECKRRFYKNWHKSKKKAF 130

  Fly   131 TKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDKVK 195
            ||..|||.||.|||.:|.||..|.:||:|||:|||:|:||:..||||||:||||:|||::.:|:.
Mouse   131 TKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRIIAHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLD 195

  Fly   196 WAREHLEKPIQVSNVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPS 260
            ||||.||:.:.|:.|||||||||.:|||||||:|||||||||||||||||:|||||||||||||:
Mouse   196 WARERLEQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLPRKTHRGLRKVACIGAWHPA 260

  Fly   261 RVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGKVIKNNASTEYDLTDKSITPMGGFPHYGE 325
            ||:.:||||||||||||||||||||:||.|...||||:|||||||:|||:||||.|:|||.||||
Mouse   261 RVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGE 325

  Fly   326 VNNDFVMIKGCCIGSKKRIITLRKSLLKHTKRSALEQIKLKFIDTSSKMGHGRFQTPADKLAFMG 390
            |.|||:|:|||.:|:|||::|||||||..|||.|||:|.||||||:||.|||||||..:|.||||
Mouse   326 VTNDFIMLKGCVVGTKKRVLTLRKSLLVQTKRRALEKIDLKFIDTTSKFGHGRFQTMEEKKAFMG 390

  Fly   391 PLKKDRL-KEEAA 402
            ||||||: |||.|
Mouse   391 PLKKDRIAKEEGA 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL3NP_524316.1 PTZ00103 1..400 CDD:240267 300/399 (75%)
Rpl3NP_038790.2 PTZ00103 1..400 CDD:240267 299/398 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..36 28/34 (82%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842775
Domainoid 1 1.000 609 1.000 Domainoid score I192
eggNOG 1 0.900 - - E1_COG0087
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H747
Inparanoid 1 1.050 652 1.000 Inparanoid score I781
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62184
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001847
OrthoInspector 1 1.000 - - oto94069
orthoMCL 1 0.900 - - OOG6_100665
Panther 1 1.100 - - LDO PTHR11363
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1136
SonicParanoid 1 1.000 - - X1206
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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