DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL3 and MRPL3

DIOPT Version :10

Sequence 1:NP_524316.1 Gene:RpL3 / 41347 FlyBaseID:FBgn0020910 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_009139.1 Gene:MRPL3 / 11222 HGNCID:10379 Length:348 Species:Homo sapiens


Alignment Length:266 Identity:58/266 - (21%)
Similarity:87/266 - (32%) Gaps:94/266 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 WAQHLSEECRRRFYKNWYKSKKKAFTKASK--------------------------------KWT 138
            |.:||||| ...|.|.....:.|| ..|||                                .||
Human    49 WDEHLSEE-NVPFIKQLVSDEDKA-QLASKLCPLKDEPWPIHPWEPGSFRVGLIALKLGMMPLWT 111

  Fly   139 DDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQK-----KAHVMEIQLNGGSIEDKVKWAR 198
            .| |:|             .|:.::......::|...|     |...:.:   ||....:.:.|.
Human   112 KD-GQK-------------HVVTLLQVQDCHVLKYTSKENCNGKMATLSV---GGKTVSRFRKAT 159

  Fly   199 EHLE----------KPIQVSNV----------------FGQDEMIDCVGVTKGKGFKGVTSRWHT 237
            ..||          :.:::.|:                |...:.:|....|.||||:||..||..
Human   160 SILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGF 224

  Fly   238 KKLP-----RKTHKGLRKVACIGAWHPSRVSTTVARAGQKGYHHRTEINKKIYRIGAGIHTKDGK 297
            |..|     .|||   |:...:......||.......|:.|..:|||...|::|    |:||...
Human   225 KGQPATHGQTKTH---RRPGAVATGDIGRVWPGTKMPGKMGNIYRTEYGLKVWR----INTKHNI 282

  Fly   298 VIKNNA 303
            :..|.:
Human   283 IYVNGS 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL3NP_524316.1 PTZ00103 1..400 CDD:240267 58/266 (22%)
MRPL3NP_009139.1 Ribosomal_L3 3..340 CDD:481189 58/266 (22%)

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