DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6689 and Zfp40

DIOPT Version :9

Sequence 1:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_038947408.1 Gene:Zfp40 / 690661 RGDID:1593410 Length:828 Species:Rattus norvegicus


Alignment Length:653 Identity:149/653 - (22%)
Similarity:244/653 - (37%) Gaps:146/653 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 CGYTEESLKLKNPCICIEHFKDEDIEGSLK-FEMG---LAKKRTLRPGAVPCVNKSQESGSD--- 102
            ||..||.:...:..|..:|...|  |.|.| .|:|   ....::|...........:..|||   
  Rat   118 CGKYEEVVDQSSKHIVYQHANIE--EKSYKCHELGKMLYDSSQSLLYNTSDTTENCKIYGSDNQW 180

  Fly   103 ----RARKERSQRRRNQELVAELLAEEEAK----------LIHP---------EATSFEQDSVYL 144
                .:...::.:.||.|       ||:.|          :|.|         |....|.|..:.
  Rat   181 DHSNESLNLKAHKSRNTE-------EEQYKDCREHLNLCSIIGPYPQIDTGKKEHKITEYDRFFD 238

  Fly   145 SETVTMELDPLSGEEKLEELQKCRTCYNDFTADFRAK---------DLFDPANSVLLF-HIEVIS 199
            |:...|.....|| ||..:.:||..|:..:::.:|.:         .|.:...|:|.| |.:|..
  Rat   239 SKHKLMIKRMCSG-EKPYQCRKCGKCFRAYSSLYRHRRTHPGEKTYKLTECNKSILYFSHQKVHY 302

  Fly   200 GVWISHKPDEPRLMCPAC---KSALD------------QAIDFREMCISTELKLSQAKPSTDEVQ 249
            .:....||.: .:.|..|   .|..:            :..|.|:..|......:..|....|..
  Rat   303 NIHYGEKPYK-CIECGKCNYHSSGFERHYRIHTGEETYKCYDCRKSFICYLGLKNHHKIHGGERP 366

  Fly   250 IEAENENPISSDHDLISDTENTNVEEIEDAGGDHVEDEATSDDQTSQEAVDEVAESPAAQDPLSV 314
            .|.:.   .|.....:|..||            |.............|....::.|...|....:
  Rat   367 YECKQ---CSKSFYTLSHLEN------------HYRTHRRQKLHRCNECGKSLSSSSGLQRHQRI 416

  Fly   315 ALGAKIF-----------KELLDQ----YTGKEK---ARLRKGAPIASKPKAKEKAAGEQKPKRS 361
            ..|.|.:           |..|..    :||::.   :...|...:.|..:..::....:||.:.
  Rat   417 HRGEKAYICAECDKCFIQKSQLKTHQKIHTGEKSYKCSECEKSFTVGSSLRIHQRIHTGEKPYKC 481

  Fly   362 ANPKTKEERNLIRRAQLR--------AKPPNFVCDQCGQAFRMSHNLRIHMLRHTRTKNYQCTEC 418
                ::..:..|::|.||        .||  :.|.:|.::|.:..:||:|...||..|.|:|::|
  Rat   482 ----SECHKCFIQQAHLRRHQKIHTGEKP--YKCSECEKSFTVGSDLRMHQKIHTGEKPYKCSDC 540

  Fly   419 PKTFYDAYMRNMHIRIRHRGETPFACGFCSETFAYPGARQKHESEVH--------NAAPRLIVKR 475
            .|.|........|.|| |.||.|:.|..|.:.|......:.|: ::|        :...:..:::
  Rat   541 DKCFIQKAKLKKHQRI-HTGEKPYKCSECEKCFTVVSDLRTHQ-KIHTGEKPYKCSECDKCFIRK 603

  Fly   476 IN----------PKPMPKPRESVRYQCKLCQKHYASKYALGWHIKSHTDANAYKCQRCSKSYSDP 530
            .|          .||         |:|..|.|.:..|..|..|.:.||....|||: |.||:|..
  Rat   604 ANLRRHHRIHTGEKP---------YKCSDCGKCFIQKANLRTHERIHTGEKPYKCE-CGKSFSVG 658

  Fly   531 NKLKRHEMTHE-KRPLQCDVCLKGFYQRTRLREHELIHTGERPYWCEVCNVNFRYKYNMKSHANS 594
            :.|::|:..|. ::|.:|..|.|.|.::..||.|:.|||||:||.|..|...|..|.|:::|  .
  Rat   659 SDLRKHQKCHTGEKPYKCSECHKCFIRKAHLRRHQRIHTGEKPYKCSDCGKCFIQKANLRTH--Q 721

  Fly   595 KMH 597
            |:|
  Rat   722 KIH 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6689NP_650051.1 THAP 2..96 CDD:283206 13/54 (24%)
zf-AD 167..240 CDD:214871 17/97 (18%)
zf-C2H2 385..407 CDD:278523 6/21 (29%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
zf-H2C2_2 399..422 CDD:290200 10/22 (45%)
C2H2 Zn finger 415..436 CDD:275368 7/20 (35%)
C2H2 Zn finger 444..460 CDD:275368 3/15 (20%)
C2H2 Zn finger 492..512 CDD:275368 6/19 (32%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
C2H2 Zn finger 547..567 CDD:275368 7/19 (37%)
zf-met 574..597 CDD:289631 7/22 (32%)
C2H2 Zn finger 575..591 CDD:275368 5/15 (33%)
Zfp40XP_038947408.1 KRAB 73..>115 CDD:214630
C2H2 Zn finger 257..277 CDD:275368 4/19 (21%)
C2H2 Zn finger 285..305 CDD:275368 6/19 (32%)
COG5048 309..709 CDD:227381 100/433 (23%)
C2H2 Zn finger 313..333 CDD:275368 3/19 (16%)
C2H2 Zn finger 341..361 CDD:275368 4/19 (21%)
C2H2 Zn finger 369..389 CDD:275368 5/34 (15%)
C2H2 Zn finger 397..417 CDD:275368 3/19 (16%)
C2H2 Zn finger 425..445 CDD:275368 2/19 (11%)
C2H2 Zn finger 453..473 CDD:275368 2/19 (11%)
C2H2 Zn finger 481..501 CDD:275368 4/23 (17%)
C2H2 Zn finger 509..529 CDD:275368 6/19 (32%)
C2H2 Zn finger 537..557 CDD:275368 7/20 (35%)
C2H2 Zn finger 565..585 CDD:275368 4/20 (20%)
C2H2 Zn finger 593..613 CDD:275368 1/19 (5%)
C2H2 Zn finger 621..641 CDD:275368 6/19 (32%)
C2H2 Zn finger 650..668 CDD:275368 6/18 (33%)
C2H2 Zn finger 676..696 CDD:275368 7/19 (37%)
C2H2 Zn finger 704..724 CDD:275368 7/21 (33%)
zf-H2C2_2 716..741 CDD:404364 4/11 (36%)
C2H2 Zn finger 732..752 CDD:275368
zf-H2C2_2 744..768 CDD:404364
C2H2 Zn finger 760..780 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24376
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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