DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6689 and znf1161

DIOPT Version :10

Sequence 1:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001232021.1 Gene:znf1161 / 559851 ZFINID:ZDB-GENE-050420-11 Length:430 Species:Danio rerio


Alignment Length:328 Identity:93/328 - (28%)
Similarity:141/328 - (42%) Gaps:61/328 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   268 TENTNVEEIEDAGGDHVEDEATSDDQTSQEAVDEVAESPAAQDPLSVALGAKIFKELLDQYTGKE 332
            |.:.:||..|       ...||..::..|..   :.:|....||....:..:..:||:|....||
Zfish     6 TRSFSVESSE-------LSSATISERQRQSL---LKDSEKMSDPEPCRIKQEESEELIDVLVEKE 60

  Fly   333 KARLRKGAPIASKPKAKEKAAGEQKPKRSANPKTKEERNLIRRAQLRAKPPNFVCDQCGQAFRMS 397
            .             :|:||    .:.|.....:||::.|.|      .|..:|.|.|||::|...
Zfish    61 S-------------EAEEK----HQVKSETETRTKDKHNSI------MKRKDFTCTQCGRSFSQK 102

  Fly   398 HNLRIHMLRHTRTKNYQCTECPKTFYDAYMRNMHIR---IRHRGETPFACGFCSETFAYPGARQK 459
            |:|.:|||.|...|.|.|:.|.|.|    .|:.|::   :.|.||.|..|..|.:.|.:|...:.
Zfish   103 HDLNVHMLIHIGEKPYMCSHCGKRF----NRSGHLKRHEMMHTGEKPHKCDQCGKLFPWPSDLKT 163

  Fly   460 HESEVHNAAPRLIVKRINPKPMPKPRESVRYQCKLCQKHYASKYALGWHIKSHTDANAYKCQRCS 524
            | ..||.          |.:|         |.|..|.|.:.....|..|.|.||...|:.|..|.
Zfish   164 H-LRVHT----------NERP---------YSCSECGKSFTYLSHLKGHQKIHTGEKAFVCSECG 208

  Fly   525 KSYSDPNKLKRHEMTHE-KRPLQCDVCLKGFYQRTRLREHELIHTGERPYWCEVCNVNFRYKYNM 588
            ||:.....||:|::.|. ::|..|.||...|.|.:.|.:|:|||||::.:.|:.|...|....::
Zfish   209 KSFIKSGDLKQHQIIHTGEKPFICTVCGMSFRQSSHLHQHKLIHTGDKTHKCDQCGKTFLRTSDL 273

  Fly   589 KSH 591
            |:|
Zfish   274 KNH 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6689NP_650051.1 THAP 2..94 CDD:214951
zf-AD 166..241 CDD:462262
zf-C2H2 385..407 CDD:395048 11/21 (52%)
C2H2 Zn finger 387..407 CDD:275368 10/19 (53%)
C2H2 Zn finger 415..436 CDD:275368 6/23 (26%)
C2H2 Zn finger 444..460 CDD:275368 4/15 (27%)
C2H2 Zn finger 492..512 CDD:275368 6/19 (32%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
C2H2 Zn finger 547..567 CDD:275368 8/19 (42%)
zf-met 573..597 CDD:463736 5/19 (26%)
C2H2 Zn finger 575..591 CDD:275368 4/15 (27%)
znf1161NP_001232021.1 C2H2 Zn finger 92..112 CDD:275368 10/19 (53%)
SFP1 <109..194 CDD:227516 30/108 (28%)
C2H2 Zn finger 120..140 CDD:275368 6/23 (26%)
C2H2 Zn finger 148..168 CDD:275368 5/20 (25%)
COG5048 <173..332 CDD:227381 37/113 (33%)
C2H2 Zn finger 176..196 CDD:275368 6/19 (32%)
C2H2 Zn finger 204..224 CDD:275368 7/19 (37%)
C2H2 Zn finger 232..252 CDD:275368 8/19 (42%)
C2H2 Zn finger 260..280 CDD:275368 5/17 (29%)
C2H2 Zn finger 288..308 CDD:275368
C2H2 Zn finger 316..336 CDD:275368
zf-H2C2_2 328..353 CDD:463886
C2H2 Zn finger 344..364 CDD:275368
C2H2 Zn finger 372..392 CDD:275368
C2H2 Zn finger 400..416 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.