DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6689 and CG1792

DIOPT Version :10

Sequence 1:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_651878.1 Gene:CG1792 / 43727 FlyBaseID:FBgn0039860 Length:372 Species:Drosophila melanogaster


Alignment Length:454 Identity:106/454 - (23%)
Similarity:175/454 - (38%) Gaps:118/454 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 QKCRTCYNDFTADFRAKDLFDPANSVLLFHIEVISGVWISHKP--DEPRLMCPACKSALDQAIDF 227
            :.|||| ..|.......:||:..|||:|..|||::|:::...|  :.|..:|..|:..|..||.|
  Fly     4 RNCRTC-GLFIFCSTPSNLFEEPNSVMLHQIEVLTGLFLLGGPGNELPPFICSPCELDLQTAIAF 67

  Fly   228 REMCISTELKLSQAKPSTDEVQ-IEAENENPISSDHDLISDTENTNVEEIEDAGGDHVEDEATSD 291
            ||..|.|: |..|..|:....: ||:   ..:..:.::....|.|.:|.|:....:|:.:|....
  Fly    68 RERVIRTQ-KTLQESPNLGNAELIES---FAVGVEKEIQYAEEVTEIEVIDLLPEEHLLEETEEP 128

  Fly   292 DQTSQEAVDEVAESPAAQDPLSVALGAKIFKELLDQYTGKEKARLRKGAPIASKPKAKEKAAGEQ 356
            .:     :.|..|.|..:.|                  .:|| :||:............|.|...
  Fly   129 YE-----ICEQNEQPQVKVP------------------AQEK-KLRRSTKTTPTVFTSVKFADNS 169

  Fly   357 KPKRSANPKTKEERNLIRRAQLRAKPPNFVCDQCGQAFRMSHNLRIHMLRHTRTKNYQCTECPKT 421
            :..|:...:..|:..:..:.:.|.:  :.:|:|||:.|....|.::|:||||..|::.|.:|.:.
  Fly   170 QATRTQWSRLTEDEVVALKRERRKR--DCICEQCGRHFTCPSNFKLHLLRHTGVKSFACDQCSQQ 232

  Fly   422 FYDAYMRNMHIRIRHRGETPFACGFCSETFAYPGARQKHESEVHNAAPRLIVKRINPKPMPKPRE 486
            ||.|.:...|..: |.|...|.|.:|..|::....|.:||.                        
  Fly   233 FYTATLLRRHQEL-HAGNALFQCRYCEATYSNASGRIQHER------------------------ 272

  Fly   487 SVRYQCKLCQKHYASKYALGWHIKSHTDANAYKCQRCSKSYSDPNKLKRHEMTHEKRPLQCDVCL 551
                                   ..||:...:.|:.|:||::...|                   
  Fly   273 -----------------------MRHTNVKPFTCKECNKSFAMSGK------------------- 295

  Fly   552 KGFYQRTRLREHELIHTGERPYWCEVCNVNFRYKYNMKSHANSKMHQ---------DNARKLGV 606
                    ||.|.|.|||.|.:.|:.|.|:|..:.::.||..||.|.         ||..:|.|
  Fly   296 --------LRTHMLSHTGVRAFHCDSCQVSFVRRSHLTSHYRSKGHAHTSSAQAALDNPVELDV 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6689NP_650051.1 THAP 2..94 CDD:214951
zf-AD 166..241 CDD:462262 28/76 (37%)
zf-C2H2 385..407 CDD:395048 8/21 (38%)
C2H2 Zn finger 387..407 CDD:275368 8/19 (42%)
C2H2 Zn finger 415..436 CDD:275368 6/20 (30%)
C2H2 Zn finger 444..460 CDD:275368 4/15 (27%)
C2H2 Zn finger 492..512 CDD:275368 0/19 (0%)
C2H2 Zn finger 520..540 CDD:275368 5/19 (26%)
C2H2 Zn finger 547..567 CDD:275368 4/19 (21%)
zf-met 573..597 CDD:463736 8/23 (35%)
C2H2 Zn finger 575..591 CDD:275368 4/15 (27%)
CG1792NP_651878.1 zf-AD 6..80 CDD:214871 28/75 (37%)
C2H2 Zn finger 198..218 CDD:275368 8/19 (42%)
C2H2 Zn finger 226..243 CDD:275368 5/16 (31%)
SUF4-like 254..>301 CDD:411020 16/120 (13%)
C2H2 Zn finger 254..275 CDD:411020 6/67 (9%)
C2H2 Zn finger 254..275 CDD:275368 6/67 (9%)
C2H2 Zn finger 283..303 CDD:275368 9/46 (20%)
C2H2 Zn finger 283..301 CDD:411020 8/44 (18%)
zf-H2C2_2 296..320 CDD:463886 12/23 (52%)
zf-met 309..333 CDD:463736 8/23 (35%)
C2H2 Zn finger 311..329 CDD:275368 6/17 (35%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.