DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6689 and CG11902

DIOPT Version :10

Sequence 1:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_651389.3 Gene:CG11902 / 43070 FlyBaseID:FBgn0028647 Length:1426 Species:Drosophila melanogaster


Alignment Length:624 Identity:137/624 - (21%)
Similarity:215/624 - (34%) Gaps:189/624 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NCR------NFSDCRSKRNAAQQQRLGFFRFPKCPDTFKAWLAFCGYTEESLKLKNPCICIEHFK 65
            ||:      :..|..|:......|:|  |:..|||..|: |       .|:|||.   :.:.|..
  Fly   898 NCQTRFVNESLLDHHSRTLCHNPQKL--FQCRKCPLRFR-W-------RENLKLH---MEVFHML 949

  Fly    66 DE--------DIEGSLK-------FEMGL-AKKRTLRPGAVPCVNKSQESGSDRAR--KERSQRR 112
            ||        .::|.|:       |.|.. ..:.||..|        |||...|.|  ..|..||
  Fly   950 DELSIQDDLPKVDGDLQCGKCNRSFRMQKDLTRHTLMHG--------QESNIFRCRWCARRFYRR 1006

  Fly   113 RNQELVAELLAEEEAKLIHPEATSFEQDSVYLSETVTMELDPLSGEEKLEELQKCRTCYNDFTAD 177
            .|       |.:..|:  |..:.|   ...|....:...::| .|.:|:|    ||.|...|   
  Fly  1007 AN-------LLQHIAR--HGISVS---QLPYAEAILDSYVNP-GGRKKVE----CRVCNVSF--- 1051

  Fly   178 FRAKDLFDPANSVLLFHIEVISGVWISHKPDEPRLMCPACKSALDQAIDFREMCISTELKLSQAK 242
                    |..:.|..|:|.:                                            
  Fly  1052 --------PTIAALRLHLETM-------------------------------------------- 1064

  Fly   243 PSTDEVQIEAENENPISSDHDLISDTENTNVEEIEDAGGDHVEDEATSDDQTSQEAVDEVAESPA 307
                          |..|.|| .|..:|.::........|..:.|  :||:.|:..:    :.|.
  Fly  1065 --------------PAGSHHD-YSSLQNYSITNQMGFEMDLYDSE--TDDEDSRTHI----KPPG 1108

  Fly   308 AQDPLSVALG------AKIFKELLDQYTGKEKARLRKGAPIASKPKAKEKAAGEQKPKRSANPKT 366
            |  |.|....      .:.|:....|.......::..|.              :....:|..|:.
  Fly  1109 A--PSSYTCNMCQLRCLRKFELYQHQQAMHRMEKISDGC--------------DSCLFKSVCPEI 1157

  Fly   367 KEERNLIRRAQLRAKPPNFVCDQCGQAFRMSHNLRIHM-LRHTRTKNYQCTEC-------PKTFY 423
            ....   :|.|...:...|.|.:||..|....||.:|| |:|.:|::.:..|.       |||  
  Fly  1158 ISHH---KRTQCENREKQFKCTRCGYKFMWESNLLLHMDLQHVKTEDQELDESKEASGDEPKT-- 1217

  Fly   424 DAYMRNMHIRIRHRGETPFACGFCSETFAYPGARQKHESEVHNAAPRLIVKRINPKPMPKPRESV 488
                         .|:. |.||.|:..:........|..:.|....:....:...:|: .|:|..
  Fly  1218 -------------EGQV-FQCGLCTRKYNRKDRLTAHLKKFHGPDCKPSTAKTPNRPI-SPKEPK 1267

  Fly   489 RYQCKLCQKHYASKYALGWHIKSHTDANAYKCQRCSKSYSDPNKLKRHEMTHE-KRPLQCDVCLK 552
            |:.|..|.|..:|...|..|::.||....:||:.|:.::...:.|:.|..||. :||..|.||.|
  Fly  1268 RFLCAFCGKAVSSSSNLIIHMRRHTGEKPFKCEYCTMAFPRSSDLQCHRRTHTGERPHVCTVCQK 1332

  Fly   553 GFYQRTRLREHELIHTGERPYWCEVCNVNFRYKYNMKSH 591
            ||.:..:|::|..||:|||||.|..|..:|....::..|
  Fly  1333 GFARSYKLQQHMRIHSGERPYKCTYCEKSFTQSNDLTLH 1371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6689NP_650051.1 THAP 2..94 CDD:214951 26/108 (24%)
zf-AD 166..241 CDD:462262 8/74 (11%)
zf-C2H2 385..407 CDD:395048 10/22 (45%)
C2H2 Zn finger 387..407 CDD:275368 9/20 (45%)
C2H2 Zn finger 415..436 CDD:275368 4/27 (15%)
C2H2 Zn finger 444..460 CDD:275368 3/15 (20%)
C2H2 Zn finger 492..512 CDD:275368 6/19 (32%)
C2H2 Zn finger 520..540 CDD:275368 4/19 (21%)
C2H2 Zn finger 547..567 CDD:275368 8/19 (42%)
zf-met 573..597 CDD:463736 5/19 (26%)
C2H2 Zn finger 575..591 CDD:275368 3/15 (20%)
CG11902NP_651389.3 zf-AD 6..83 CDD:462262
C2H2 Zn finger 208..228 CDD:275370
C2H2 Zn finger 236..256 CDD:275370
C2H2 Zn finger 384..405 CDD:275368
C2H2 Zn finger 417..437 CDD:275368
C2H2 Zn finger 447..463 CDD:275368
C2H2 Zn finger 578..599 CDD:275368
C2H2 Zn finger 610..629 CDD:275368
C2H2 Zn finger 640..660 CDD:275368
SUF4-like 673..>726 CDD:411020
C2H2 Zn finger 676..703 CDD:411020
C2H2 Zn finger 676..696 CDD:275368
C2H2 Zn finger 706..726 CDD:411020
C2H2 Zn finger 706..726 CDD:275368
C2H2 Zn finger 762..782 CDD:275368
C2H2 Zn finger 866..887 CDD:275368
C2H2 Zn finger 896..918 CDD:275368 4/19 (21%)
C2H2 Zn finger 926..947 CDD:275368 9/31 (29%)
C2H2 Zn finger 967..987 CDD:275368 4/19 (21%)
C2H2 Zn finger 996..1016 CDD:275368 7/28 (25%)
C2H2 Zn finger 1044..1063 CDD:275368 7/29 (24%)
C2H2 Zn finger 1224..1244 CDD:275368 4/19 (21%)
C2H2 Zn finger 1271..1291 CDD:275368 6/19 (32%)
zf-H2C2_2 1283..1306 CDD:463886 7/22 (32%)
C2H2 Zn finger 1299..1319 CDD:275368 4/19 (21%)
C2H2 Zn finger 1327..1347 CDD:275368 8/19 (42%)
zf-H2C2_2 1340..1364 CDD:463886 12/23 (52%)
SFP1 <1349..1405 CDD:227516 9/23 (39%)
C2H2 Zn finger 1355..1375 CDD:275368 4/17 (24%)
C2H2 Zn finger 1383..1401 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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