DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6689 and Zfp553

DIOPT Version :9

Sequence 1:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001347841.1 Gene:Zfp553 / 233887 MGIID:2384725 Length:591 Species:Mus musculus


Alignment Length:385 Identity:92/385 - (23%)
Similarity:140/385 - (36%) Gaps:106/385 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   276 IEDAGGDHVEDEATSDDQTSQEAVDEVAESPAAQ--------DPLSVALGAKIFKELLDQYTGKE 332
            :|.:.||  |.|.:..::...|..:|...:|..|        |      |.:.:.:|.|:..|..
Mouse     1 MEASPGD--EFEHSPQERDGPEIKEEEQLAPTLQVGNTSLKPD------GIQCWDDLWDRREGLG 57

  Fly   333 KARLRKGAPIASKPKAKEKAAGEQKPKRSANPKTKEERNLIRRAQLRAKPPNFVCDQCGQAFRMS 397
            |.:.|...|         :..||.:..:.:|.:..                  ||.:||::||..
Mouse    58 KRQPRDPVP---------RILGEPRWGQGSNDRAA------------------VCGECGKSFRQM 95

  Fly   398 HNLRIHMLRHTRTKNYQCTECPKTFYDAYMRNMH---------IRIR------------------ 435
            .:|..|...||..|.|:|..|.|.|.|:..|..|         .|:|                  
Mouse    96 SDLVKHQRTHTGEKPYKCGVCGKGFGDSSARIKHQRTHTGEKAYRVRPPAPGPPKMPRSRIPAGE 160

  Fly   436 ------------------------HRGETPFACGFCSETFAYPGARQKHESEVH--NAAPRLIVK 474
                                    |.||.|:.||.|.:.|....||.||: ..|  :..||.:|.
Mouse   161 RPTICGECGKSFRQSSDLVKHQRTHTGEKPYKCGICGKGFGDSSARIKHQ-RTHRGDQLPRPVVP 224

  Fly   475 RINPKP-------MPKPRESVRYQCKLCQKHYASKYALGWHIKSHTDANAYKCQRCSKSYSDPNK 532
            |..|.|       .||.::. .|.|..|.|.:....:|..|.:||.....:.|..|.|.::..:.
Mouse   225 RRQPSPAAPAAPHRPKAQDK-PYICTDCGKRFVLSCSLLSHQRSHLGPKPFGCDVCGKEFARGSD 288

  Fly   533 LKRHEMTHE-KRPLQCDVCLKGFYQRTRLREHELIHTGERPYWCEVCNVNFRYKYNMKSH 591
            |.:|...|. ::|..|..|.|||...:...:|...|:|:||:.|..||.:|.....:..|
Mouse   289 LVKHLRVHTGEKPYLCPECGKGFADSSARVKHLRTHSGQRPHACPECNRSFSLSSTLLRH 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6689NP_650051.1 THAP 2..96 CDD:283206
zf-AD 167..240 CDD:214871
zf-C2H2 385..407 CDD:278523 8/21 (38%)
C2H2 Zn finger 387..407 CDD:275368 7/19 (37%)
zf-H2C2_2 399..422 CDD:290200 9/22 (41%)
C2H2 Zn finger 415..436 CDD:275368 9/71 (13%)
C2H2 Zn finger 444..460 CDD:275368 6/15 (40%)
C2H2 Zn finger 492..512 CDD:275368 5/19 (26%)
C2H2 Zn finger 520..540 CDD:275368 5/19 (26%)
C2H2 Zn finger 547..567 CDD:275368 6/19 (32%)
zf-met 574..597 CDD:289631 5/18 (28%)
C2H2 Zn finger 575..591 CDD:275368 4/15 (27%)
Zfp553NP_001347841.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24 6/24 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 55..80 6/33 (18%)
C2H2 Zn finger 85..105 CDD:275368 7/19 (37%)
zf-H2C2_2 97..120 CDD:316026 9/22 (41%)
C2H2 Zn finger 113..133 CDD:275368 7/19 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 131..160 2/28 (7%)
COG5048 161..572 CDD:227381 51/190 (27%)
C2H2 Zn finger 165..185 CDD:275368 0/19 (0%)
C2H2 Zn finger 193..213 CDD:275368 8/20 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..241 11/35 (31%)
C2H2 Zn finger 248..268 CDD:275368 5/19 (26%)
C2H2 Zn finger 276..296 CDD:275368 5/19 (26%)
C2H2 Zn finger 304..324 CDD:275368 6/19 (32%)
C2H2 Zn finger 332..352 CDD:275368 5/17 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..429
C2H2 Zn finger 425..445 CDD:275368
C2H2 Zn finger 453..538 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 464..512
C2H2 Zn finger 546..566 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 564..591
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24376
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.