DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6689 and Zfp52

DIOPT Version :9

Sequence 1:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_653098.2 Gene:Zfp52 / 22710 MGIID:99199 Length:724 Species:Mus musculus


Alignment Length:626 Identity:140/626 - (22%)
Similarity:232/626 - (37%) Gaps:142/626 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 CGYTEESLKLKNPCICIEHFKDEDIEGSLKFEMGLAKKRTLRPGAVPCVNKSQES-GSDRARKER 108
            |...|.:..|..|..|..:.:.:..|.|..:.               |.|:...| .|..|.:.:
Mouse    72 CPCNELNEMLHEPSNCALYNRSDTTEASNNYR---------------CCNEKDASVDSSNADRHK 121

  Fly   109 SQRRRNQELVAELLAEEEAKL---------IHPEATSFEQD-------SVY--LSETVTMELDP- 154
            |.....::.......|:...|         ::.|....:||       |:|  :.|||.||..| 
Mouse   122 SMHIGEEDTCQSKDCEKSFNLCSNIRQYQRLNTEKKEHKQDEHDDHFSSLYSLMQETVDMEEKPY 186

  Fly   155 --------------LSGEEKL---EELQKCRTCYNDF-------------TA--DFRAKDLFDPA 187
                          ||..:::   |:..||..|...|             ||  .::.|:     
Mouse   187 QCGHCRKYFSTTSSLSIHQRIHTGEKPYKCNICGKSFNQWSSLKTDQTLHTAKKPYKCKE----- 246

  Fly   188 NSVLLFHIEVISGVWISHKPDEPRLMCPACKSALDQAIDFREMCISTELKLSQAKPSTDEVQIEA 252
            ...||..:..:......|..::| ..|..|.         |.......|:..| |..:.|:..|.
Mouse   247 GGKLLVQLSALKSHQRRHTGEKP-YKCQQCD---------RSFAHCASLRWHQ-KIHSPEIHYEC 300

  Fly   253 EN------ENPISSDHDLISDTENTNVEEIEDAGGDHVEDEATSDDQTSQEAVDEVAESP----A 307
            :.      |......|..|...|.....|:.|.       ..|.:............|.|    .
Mouse   301 KECGKSCFELSHLKRHCRIHTAEKPYRYEVCDT-------SITVNSTLKTHHKIHTREKPYRYRE 358

  Fly   308 AQDPLSVALGAKIFKELLDQYTGKEKARLRKGAPIASKP---KAKEKAAGEQKPKRSANPKTKE- 368
            ....::.....:.::.:   :|||...|..:.....:|.   :..:|....:||     ||.|: 
Mouse   359 CDKSITKCSYLRTYQRV---HTGKRPYRCTECDKFFTKHSNLRQHQKIHTGEKP-----PKCKDC 415

  Fly   369 ERNLIR------RAQLRAKPPNFVCDQCGQAFRMSHNLRIHMLRHTRTKNYQCTECPKTFYDAYM 427
            :::.:|      |.::.|....:.|.:||::|....|||:|...||..:.|:|.||.|:|.....
Mouse   416 DKSFLRISSVRIRQKIHAGERRYRCKECGRSFTWFSNLRVHQRVHTGERPYRCKECGKSFTTGSN 480

  Fly   428 RNMHIRIRHRGETPFACGFCSETFAYPGARQKHESEVHNAAPRLIVKRINPKPMPKPRESVRYQC 492
            ..:|.:| |.||.|:.|..|..:|.:....:.|: ::|..              .||     |:|
Mouse   481 LRVHQKI-HTGEKPYKCKDCDISFLWISNLRTHQ-KIHTG--------------EKP-----YKC 524

  Fly   493 KLCQKHYASKYALGWHIKSHTDANAYKCQRCSKSYSDPNKLKRHEMTHE-KRPLQCDVCLKGFYQ 556
            :.|.|.:.....|..|.|.||....|||:.|..|:...:.|:||:..|. ::|.:|..|.|.|.|
Mouse   525 QECNKSFTRCSYLRDHQKIHTGEKLYKCKDCDISFMWISSLRRHQKIHTGEKPYKCRGCEKSFTQ 589

  Fly   557 RTRLREHELIHTGERPYWCEVCNVNFRYKYNMKSHANSKMH 597
            .:.||:|:.|||||:||.|:.|.::|.:..:::.|  .|:|
Mouse   590 CSTLRDHQKIHTGEKPYKCKDCGISFLWISSLRRH--QKIH 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6689NP_650051.1 THAP 2..96 CDD:283206 9/50 (18%)
zf-AD 167..240 CDD:214871 14/87 (16%)
zf-C2H2 385..407 CDD:278523 8/21 (38%)
C2H2 Zn finger 387..407 CDD:275368 8/19 (42%)
zf-H2C2_2 399..422 CDD:290200 11/22 (50%)
C2H2 Zn finger 415..436 CDD:275368 7/20 (35%)
C2H2 Zn finger 444..460 CDD:275368 3/15 (20%)
C2H2 Zn finger 492..512 CDD:275368 6/19 (32%)
C2H2 Zn finger 520..540 CDD:275368 6/19 (32%)
C2H2 Zn finger 547..567 CDD:275368 8/19 (42%)
zf-met 574..597 CDD:289631 5/22 (23%)
C2H2 Zn finger 575..591 CDD:275368 3/15 (20%)
Zfp52NP_653098.2 KRAB 12..52 CDD:366587
C2H2 Zn finger 134..153 CDD:275368 2/18 (11%)
COG5048 184..615 CDD:227381 111/482 (23%)
C2H2 Zn finger 188..208 CDD:275368 2/19 (11%)
C2H2 Zn finger 216..264 CDD:275368 8/52 (15%)
C2H2 Zn finger 244..259 CDD:275368 3/19 (16%)
C2H2 Zn finger 272..292 CDD:275368 6/29 (21%)
C2H2 Zn finger 300..320 CDD:275368 2/19 (11%)
C2H2 Zn finger 329..348 CDD:275368 3/25 (12%)
C2H2 Zn finger 357..376 CDD:275368 0/21 (0%)
C2H2 Zn finger 384..404 CDD:275368 2/19 (11%)
C2H2 Zn finger 412..432 CDD:275368 3/19 (16%)
C2H2 Zn finger 440..460 CDD:275368 8/19 (42%)
C2H2 Zn finger 468..488 CDD:275368 7/20 (35%)
C2H2 Zn finger 496..516 CDD:275368 4/20 (20%)
C2H2 Zn finger 524..544 CDD:275368 6/19 (32%)
C2H2 Zn finger 552..572 CDD:275368 6/19 (32%)
C2H2 Zn finger 580..600 CDD:275368 8/19 (42%)
C2H2 Zn finger 608..628 CDD:275368 5/21 (24%)
zf-H2C2_2 620..643 CDD:372612 3/11 (27%)
C2H2 Zn finger 636..656 CDD:275368
zf-H2C2_2 648..673 CDD:372612
C2H2 Zn finger 664..684 CDD:275368
zf-H2C2_5 690..714 CDD:372805
C2H2 Zn finger 692..712 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24376
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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