DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6689 and tra-4

DIOPT Version :10

Sequence 1:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster
Sequence 2:NP_001370327.1 Gene:tra-4 / 180575 WormBaseID:WBGene00018740 Length:543 Species:Caenorhabditis elegans


Alignment Length:462 Identity:88/462 - (19%)
Similarity:149/462 - (32%) Gaps:160/462 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 ENENPISSDHDLIS--DTENTNVEEIEDAGGDHVEDEATSDDQTSQEAVDEVAESPAAQDPLSVA 315
            ::|..:::..|||.  :||.|.:.|      |.:.|:...||.      ||..:.....:.|:.|
 Worm    64 DDEMDLNNKTDLIPLLETEKTTINE------DELYDDEEDDDD------DEEIKKGIGFELLAQA 116

  Fly   316 LGAKIFKELLDQYTGKEKARL------RKGAPIASKPKAKEKAAGEQKPKRSANP------KTKE 368
            ||......:..:...||:|:|      .|......||..||:...::...|..:|      :..|
 Worm   117 LGMSAKVPVEKEEPEKERAKLSGVGEFMKQIRGEIKPIQKERIVLDELGFRVRDPSKFPPCRIAE 181

  Fly   369 ERNLIRRAQ----LRAKPPNFVCDQCGQAFRMSHNLRIHMLRHTRTKNYQCTECPKTFYDAYMRN 429
            .:..:..|.    :...|||...|           :|| :.:..|.|..:|.:|...|.:..:..
 Worm   182 VQQTLTLADHQDGIDLPPPNAPTD-----------VRI-VRKLIRQKMVRCKKCKNRFIEKNIYE 234

  Fly   430 MHIRIRHRGETPFACGFCSETFAYPGARQKHESEVH-NAAPRLIVKRI----------------- 476
            .|:|.:|..             .|....::.|.||. .....:...||                 
 Worm   235 RHLRDKHPD-------------LYEEYIREQEEEVELQRLEEIEANRIEELQTGGFIPPENEISQ 286

  Fly   477 ---NPKPMPKPRES------------------------VRYQCKLCQKHYASKYALGWHI----- 509
               :|..:|.|.|:                        |..||..|.|.:.::::|..|.     
 Worm   287 PSEDPNYIPLPGENNGGLVPRFDYYGRIKQLKRPYKKKVSPQCPFCDKRFRNEFSLKKHFAKKHE 351

  Fly   510 ----------------------------------------------------KSHTDANA-YKCQ 521
                                                                |.|..||: ::|.
 Worm   352 EMVEFQQCLKCFKCVENDAEMANHDCELTYVCFECTPIRNLCTDNRLLNHRKKFHRGANSGFRCS 416

  Fly   522 RCSKSYSDPNKLKRH-EMTHE-KRPLQCDVCLKGFYQRTRLREHELIHTGERPYWCEVCNVNFRY 584
            .|:..:..|.||::| :|:|. .:..||..|.:.|.....:..||.:|||...:.|:||:.....
 Worm   417 FCNMKFLTPRKLRKHKKMSHVFTKTFQCHFCEEIFISEVAVMTHERMHTGIIKFECKVCDFRANR 481

  Fly   585 KYNMKSH 591
            ...|:.|
 Worm   482 YTAMEEH 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6689NP_650051.1 THAP 2..94 CDD:214951
zf-AD 166..241 CDD:462262
zf-C2H2 385..407 CDD:395048 3/21 (14%)
C2H2 Zn finger 387..407 CDD:275368 3/19 (16%)
C2H2 Zn finger 415..436 CDD:275368 5/20 (25%)
C2H2 Zn finger 444..460 CDD:275368 1/15 (7%)
C2H2 Zn finger 492..512 CDD:275368 6/76 (8%)
C2H2 Zn finger 520..540 CDD:275368 7/20 (35%)
C2H2 Zn finger 547..567 CDD:275368 5/19 (26%)
zf-met 573..597 CDD:463736 5/19 (26%)
C2H2 Zn finger 575..591 CDD:275368 4/15 (27%)
tra-4NP_001370327.1 COG5236 <329..>519 CDD:227561 31/160 (19%)
C2H2 Zn finger 415..436 CDD:275368 7/20 (35%)
C2H2 Zn finger 444..464 CDD:275368 5/19 (26%)
C2H2 Zn finger 472..490 CDD:275368 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.

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