DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6689 and znf628

DIOPT Version :10

Sequence 1:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_002941933.2 Gene:znf628 / 100489381 XenbaseID:XB-GENE-5996090 Length:1095 Species:Xenopus tropicalis


Alignment Length:238 Identity:76/238 - (31%)
Similarity:111/238 - (46%) Gaps:47/238 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 KPP---------NFVCDQCGQAFRMSHNLRIHMLRHTRTKNYQCTECPKTFYDAYMRNMHIRIRH 436
            :||         .:.|.:||:.|:.|..|..|...||..:.|:||||||.|..:.....|.| .|
 Frog    19 QPPVQTVESNDHQYECHECGKVFKWSSRLIHHQRTHTGERPYKCTECPKAFKGSSALLYHQR-SH 82

  Fly   437 RGETPFACGFCSETFAYPGARQKHESEVHNAAPRLIVKRINPKPMPKPRESVRYQCKLC------ 495
            .||.|:.|..|.:.|......|.|:| ||..     ||              .::|.:|      
 Frog    83 TGERPYKCESCGKAFKRSSLLQIHQS-VHTG-----VK--------------SFKCNICGMAFKW 127

  Fly   496 QKHYASKYALGWHIKSHTDANAYKCQRCSKSYSDPNKLKRHEMTHE-KRPLQCDVCLKGFYQRTR 559
            ..||.      :|::.||....|:|..|.|::.:.:.|:||...|. :||.:|.:|.|.|.|.|.
 Frog   128 SSHYQ------YHVRQHTGERPYQCNVCEKAFKNSSSLRRHRNIHTGERPYECAICGKAFTQSTN 186

  Fly   560 LREHELIHTGERPYWCEVCNVNFRYKYNM----KSHANSKMHQ 598
            ||:|:.||||||||.||.|..:|.:..|:    ::|:....|:
 Frog   187 LRQHQRIHTGERPYKCEDCGKSFTHSSNLLLHQRTHSAGVSHK 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6689NP_650051.1 THAP 2..94 CDD:214951
zf-AD 166..241 CDD:462262
zf-C2H2 385..407 CDD:395048 7/21 (33%)
C2H2 Zn finger 387..407 CDD:275368 7/19 (37%)
C2H2 Zn finger 415..436 CDD:275368 9/20 (45%)
C2H2 Zn finger 444..460 CDD:275368 4/15 (27%)
C2H2 Zn finger 492..512 CDD:275368 5/25 (20%)
C2H2 Zn finger 520..540 CDD:275368 6/19 (32%)
C2H2 Zn finger 547..567 CDD:275368 9/19 (47%)
zf-met 573..597 CDD:463736 7/27 (26%)
C2H2 Zn finger 575..591 CDD:275368 5/19 (26%)
znf628XP_002941933.2 C2H2 Zn finger 34..54 CDD:275368 7/19 (37%)
zf-H2C2_2 50..70 CDD:463886 10/19 (53%)
C2H2 Zn finger 62..82 CDD:275368 9/20 (45%)
zf-H2C2_2 74..99 CDD:463886 9/25 (36%)
C2H2 Zn finger 90..110 CDD:275368 6/20 (30%)
C2H2 Zn finger 118..138 CDD:275368 5/25 (20%)
COG5048 142..576 CDD:227381 34/88 (39%)
C2H2 Zn finger 146..166 CDD:275368 6/19 (32%)
C2H2 Zn finger 174..194 CDD:275368 9/19 (47%)
C2H2 Zn finger 202..222 CDD:275368 5/19 (26%)
C2H2 Zn finger 230..250 CDD:275368 76/238 (32%)
C2H2 Zn finger 280..300 CDD:275368
C2H2 Zn finger 307..328 CDD:275370
C2H2 Zn finger 336..356 CDD:275368
C2H2 Zn finger 396..416 CDD:275368
C2H2 Zn finger 424..444 CDD:275368
C2H2 Zn finger 452..472 CDD:275368
C2H2 Zn finger 480..500 CDD:275368
C2H2 Zn finger 508..528 CDD:275368
C2H2 Zn finger 536..556 CDD:275368
C2H2 Zn finger 564..584 CDD:275368
SP1-4_N <586..>840 CDD:425404
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.