DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6689 and LOC100488006

DIOPT Version :10

Sequence 1:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster
Sequence 2:XP_002937452.2 Gene:LOC100488006 / 100488006 XenbaseID:XB-GENE-29079027 Length:383 Species:Xenopus tropicalis


Alignment Length:418 Identity:104/418 - (24%)
Similarity:155/418 - (37%) Gaps:111/418 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   246 DEVQIEAENENPISSDHDL-----------ISDTENTNVEEIEDAGGDHVEDEATSDDQTSQEAV 299
            |:.||:.|::     |.|.           |...|||::       |:.:.|.:.....|...  
 Frog     8 DDEQIDEEDK-----DGDCIIVKEGETKRGIKTEENTDI-------GNKLRDPSPGKSCTGAN-- 58

  Fly   300 DEVAESPAAQDPLSVALG-----AKIFKELLDQYTGKEKARLRKGA--PIASKPKAKEKAAGEQK 357
                        |.||.|     |:|.:..::....:.|.|:.|..  .|....::.|.:..|.:
 Frog    59 ------------LMVAGGFDQQEAEIKEYFIENPGNRAKFRINKATWENIHKGSESSENSLDESE 111

  Fly   358 PKRSANPKTK-----------EERNLI--RRAQLRAKPPNFVCDQCGQAFRMSHNLRIHMLRHTR 409
            .|.....:.:           ...:||  ||:....||  |.|..||:.|....:|.||...||.
 Frog   112 SKMDFGVQKRCVCIDCGRSFSYVSHLIIHRRSHTGEKP--FECGMCGKCFARKCSLVIHERIHTG 174

  Fly   410 TKNYQCTECPKTFYDAYMRNMHIRIRHRGETPFACGFCSETFAYPGARQKHESEVHNAAPRLIVK 474
            .:.|.|.:|.|.|..:.....|.|| |.||.|:.|..|.::|....:...| :..|..       
 Frog   175 ERPYPCPDCGKRFTSSATLTTHKRI-HTGERPYICWECGKSFTSNSSLFLH-NRTHTG------- 230

  Fly   475 RINPKPMPKPRESVRYQCKLCQKHYASKYALGWHIKSHTDANAYKCQRCSKSYSDPNKLKRHEMT 539
                   .||     |:||.|.|.::...||..|.::||....|.|..|.||:.|.::|.:|:.|
 Frog   231 -------EKP-----YECKQCGKTFSCSSALVTHTRTHTGEKPYTCAECGKSFFDNSRLLKHQAT 283

  Fly   540 HE-----------------------------KRPLQCDVCLKGFYQRTRLREHELIHTGERPYWC 575
            |.                             :||..|..|.|.|...:.|..|:..|||||||.|
 Frog   284 HTGEWAYMCTICGKGFTCISNLNVHQRSHTGERPFSCGQCGKSFTNNSYLVRHQTTHTGERPYPC 348

  Fly   576 EVCNVNFRYKYNMKSHANSKMHQDNARK 603
            .:|...|..|.::.:|  .|:|.....|
 Frog   349 PICGKTFTRKGHVVTH--QKIHTKKMEK 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6689NP_650051.1 THAP 2..94 CDD:214951
zf-AD 166..241 CDD:462262
zf-C2H2 385..407 CDD:395048 8/21 (38%)
C2H2 Zn finger 387..407 CDD:275368 7/19 (37%)
C2H2 Zn finger 415..436 CDD:275368 7/20 (35%)
C2H2 Zn finger 444..460 CDD:275368 3/15 (20%)
C2H2 Zn finger 492..512 CDD:275368 7/19 (37%)
C2H2 Zn finger 520..540 CDD:275368 7/19 (37%)
C2H2 Zn finger 547..567 CDD:275368 6/19 (32%)
zf-met 573..597 CDD:463736 7/23 (30%)
C2H2 Zn finger 575..591 CDD:275368 4/15 (27%)
LOC100488006XP_002937452.2 C2H2 Zn finger 124..144 CDD:275368 4/19 (21%)
zf-H2C2_2 136..161 CDD:463886 11/26 (42%)
C2H2 Zn finger 152..172 CDD:275368 7/19 (37%)
COG5048 <177..327 CDD:227381 44/170 (26%)
C2H2 Zn finger 180..200 CDD:275368 7/20 (35%)
C2H2 Zn finger 208..228 CDD:275368 4/20 (20%)
C2H2 Zn finger 236..256 CDD:275368 7/19 (37%)
C2H2 Zn finger 264..284 CDD:275368 7/19 (37%)
C2H2 Zn finger 292..312 CDD:275368 0/19 (0%)
C2H2 Zn finger 320..340 CDD:275368 6/19 (32%)
zf-H2C2_2 332..357 CDD:463886 12/24 (50%)
C2H2 Zn finger 348..368 CDD:275368 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.

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