DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG4820 and TT1

DIOPT Version :9

Sequence 1:	NP_001097748.1	Gene:	CG4820 / 41344	FlyBaseID:	FBgn0037876	Length:	362	Species:	Drosophila melanogaster
Sequence 2:	NP_174737.2	Gene:	TT1 / 840386	AraportID:	AT1G34790	Length:	303	Species:	Arabidopsis thaliana

Alignment Length:	288	Identity:	58/288 - (20%)
Similarity:	96/288 - (33%)	Gaps:	96/288 - (33%)

- Green bases have known domain annotations that are detailed below.

  Fly   102 PDPLGIDELMSASDIKIEPIQLQMEEDPQAPYPENQLEQAL---------SYGNAPGEDILPLPE 157
            |.|| ||.:...|::.:.|..|..||..|....|.:.::.:         .:|. |..|...|.:
plant    44 PLPL-IDRINLNSNLDLNPNPLYAEEGEQEEEEEEEEDREVDVDLHIGLPGFGK-PSNDAKQLKK 106

  Fly   158 DYGEAQTEVATTTNEPAQRRSKNTAKIKSKKHTMRVGRKLI----HVKVIDDKQPKRIVDRNGPS 218
            ..|:   |:||   ..|.:..:|  ::..|.:.:....:::    |..
plant   107 RNGK---EIAT---YDAGKGIEN--ELSGKAYWIPAPEQILIGFTHFS----------------- 146

  Fly   219 AKPCICEHCGRQFKDTSNLHVHLLRH-----------TGTKP-----FECDQCHQKCYTLHL--- 264
                 |..|.:.|...:||.:|:..|           .||:|     ..|..|.:.|.. |:
plant   147 -----CHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRN-HIDHP 205

  Fly   265 ----------LRRH-QLKHTEGPYACTFCGLEYSTNSSRVRHEREACKKGRAPQSKWEIIKKGER 318
                      |:.| :.||...|::|..||...:.......||:. |.|      :|.
plant   206 RSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTHEKN-CGK------RWV------- 256

  Fly   319 TFHCEVCDLWFLRAGNFTQHINS--SSH 344
               | ||...|....:...|:.:  |.|
plant   257 ---C-VCGSDFKHKRSLKDHVKAFGSGH 280

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG4820	NP_001097748.1	zf-AD	4..75	CDD:285071
		C2H2 Zn finger	224..244	CDD:275368	6/19 (32%)
		C2H2 Zn finger	252..272	CDD:275368	6/33 (18%)
		C2H2 Zn finger	279..297	CDD:275368	4/17 (24%)
		C2H2 Zn finger	322..339	CDD:275368	4/16 (25%)
TT1	NP_174737.2	C2H2 Zn finger	231..247	CDD:275368	3/15 (20%)
TT1	NP_174737.2	C2H2 Zn finger	257..274	CDD:275368	5/17 (29%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	62	1.000	Inparanoid score	I2531
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.050