DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and vezf1a

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:XP_005169243.1 Gene:vezf1a / 567023 ZFINID:ZDB-GENE-040108-4 Length:488 Species:Danio rerio


Alignment Length:238 Identity:62/238 - (26%)
Similarity:85/238 - (35%) Gaps:64/238 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 ATTTNEPAQRRSKNTAKIKSKKHTMRVGRKLIHVKVIDDKQPKRIVDRNGPSAKPCICEHCGRQF 231
            |||:...|......|:.....:|:            ...|.||.:...:|       ||.||:.|
Zfish   162 ATTSTSSASTVMSPTSMSNVTQHS------------APKKPPKPVKKNHG-------CEMCGKAF 207

  Fly   232 KDTSNLHVHLLRHTGTKPFECDQCHQKCYTLHLLRRHQLKHTEG---PYACTFCGLEYSTN---S 290
            :|..:|:.|.|.|:..|||||..|.|:......:..|...|..|   ||.|:.||..:|..   |
Zfish   208 RDVYHLNRHKLSHSDEKPFECPICQQRFKRKDRMTYHVRSHDGGVHKPYVCSVCGKGFSRPDHLS 272

  Fly   291 SRVRH----ER------EACKKGRAPQSKWE---IIKKGERTFHCEVCDLWFLRAGNFTQHI--N 340
            ..|:|    ||      .||....|.:.:..   |..:|:.|  |.||.. .|.|...|.|:  :
Zfish   273 CHVKHVHSSERPFKCQVTACTSAFATKDRLRSHMIRHEGKVT--CNVCGK-MLSAAYITSHLKTH 334

  Fly   341 SSSHIENERRK---------------------KRKSNPTAINS 362
            ..|:..|...|                     .||.|....||
Zfish   335 GQSNFNNACNKGYALSVHGARHSGDWQWNHSGLRKDNTEVCNS 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262
SUF4-like 224..>279 CDD:411020 22/57 (39%)
C2H2 Zn finger 224..244 CDD:411020 9/19 (47%)
C2H2 Zn finger 224..244 CDD:275368 9/19 (47%)
C2H2 Zn finger 252..272 CDD:275368 4/19 (21%)
C2H2 Zn finger 279..297 CDD:275368 7/24 (29%)
C2H2 Zn finger 322..339 CDD:275368 6/16 (38%)
vezf1aXP_005169243.1 C2H2 Zn finger 95..115 CDD:275368
C2H2 Zn finger 200..220 CDD:275368 9/19 (47%)
SFP1 <222..279 CDD:227516 19/56 (34%)
C2H2 Zn finger 228..248 CDD:275368 4/19 (21%)
C2H2 Zn finger 258..276 CDD:275368 5/17 (29%)
C2H2 Zn finger 287..309 CDD:275368 4/21 (19%)
C2H2 Zn finger 315..334 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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