DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and vezf1b

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_001073432.1 Gene:vezf1b / 556915 ZFINID:ZDB-GENE-060825-121 Length:460 Species:Danio rerio


Alignment Length:158 Identity:48/158 - (30%)
Similarity:68/158 - (43%) Gaps:29/158 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 IDDKQPKRIVDRNGPSAKPCICEHCGRQFKDTSNLHVHLLRHTGTKPFECDQCHQKCYTLHLLRR 267
            :..|.||.:...:|       ||.||:.|:|..:|:.|.|.|:..|||||..|||:......:..
Zfish   180 VPKKPPKPVKKNHG-------CEMCGKAFRDVYHLNRHKLSHSDEKPFECPICHQRFKRKDRMTY 237

  Fly   268 HQLKHTEG---PYACTFCGLEYSTN---SSRVRH----ER------EACKKGRAPQSKWE---II 313
            |...|..|   ||.|:.||..:|..   |..|:|    ||      .||....|.:.:..   |.
Zfish   238 HVRSHDGGVHKPYICSVCGKGFSRPDHLSCHVKHVHSTERPFKCQVTACTSAFATKDRLRSHMIR 302

  Fly   314 KKGERTFHCEVCDLWFLRAGNFTQHINS 341
            .:|:.|  |.:|.. .|.|...|.|:.:
Zfish   303 HEGKVT--CNICGK-MLSAAYITSHLKT 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262
SUF4-like 224..>279 CDD:411020 23/57 (40%)
C2H2 Zn finger 224..244 CDD:411020 9/19 (47%)
C2H2 Zn finger 224..244 CDD:275368 9/19 (47%)
C2H2 Zn finger 252..272 CDD:275368 5/19 (26%)
C2H2 Zn finger 279..297 CDD:275368 7/24 (29%)
C2H2 Zn finger 322..339 CDD:275368 5/16 (31%)
vezf1bNP_001073432.1 C2H2 Zn finger 93..113 CDD:275368
C2H2 Zn finger 194..214 CDD:275368 9/19 (47%)
SFP1 <216..273 CDD:227516 20/56 (36%)
C2H2 Zn finger 222..242 CDD:275368 5/19 (26%)
C2H2 Zn finger 252..270 CDD:275368 5/17 (29%)
C2H2 Zn finger 281..303 CDD:275368 4/21 (19%)
C2H2 Zn finger 309..328 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

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