DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4820 and CG4424

DIOPT Version :10

Sequence 1:NP_001097748.1 Gene:CG4820 / 41344 FlyBaseID:FBgn0037876 Length:362 Species:Drosophila melanogaster
Sequence 2:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster


Alignment Length:383 Identity:91/383 - (23%)
Similarity:145/383 - (37%) Gaps:95/383 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKEFCRTC---GKT------VVADECLQIFTPAGRKLLQCVRSITNCWLQ---NVQDLPNHICTD 53
            |...||||   |:.      ..||:.|    |.|..|...:.|::...::   ..:.||..||..
  Fly     7 MMTLCRTCLQDGEAHMVSIFQTADDRL----PGGVSLCDKIESLSGIQIRATAKEEVLPTRICLR 67

  Fly    54 CQVLLSQVQKFRRRCAKIEKYFARRRRRMNLGEAPAAMEQLRVQQAAAPDPLGIDELMSASDIKI 118
            |:..|:...|||:.|.:..: |.|.....:..|.....|.::..:.:.|.|:..::|....|..:
  Fly    68 CKAFLTLAHKFRQICQRSNE-FLREYVIKDAVEQGVVKEVVQQTRPSTPPPIETEQLEPPEDEVL 131

  Fly   119 E--------PIQLQMEEDPQAPYPENQLEQALSYGNAPGEDILPLPEDYGEAQTEVATTTNEPAQ 175
            |        ||    ||.|..| .|.:....|:.      ::||.|       .....:|..||.
  Fly   132 EEGVWSTEDPI----EETPHGP-AEKERPTVLTV------EMLPAP-------YPPPASTPPPAP 178

  Fly   176 RRSKNTAKIKSKKHTMRVGRKLIHVKVIDDKQPKRIVDRNGPSAKPCICEHCGRQFKDTSNLHVH 240
                 ...:|.|.|                                 :|..||..:...|.|..|
  Fly   179 -----AGAVKGKLH---------------------------------VCAICGNGYPRKSTLDTH 205

  Fly   241 LLRHTGTKPFECDQCHQKCYTLHLLRRHQLKHTEG-PYACTFCGLEYSTNSSRVRHERE------ 298
            :.||...:|:||:.||:..:..:.|:||..:||.. ||.|.:|...::..:|.|:|||.      
  Fly   206 MRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERP 270

  Fly   299 -ACKKGRAPQSKWEIIK------KGERTFHCEVCDLWFLRAGNFTQHINSSSHIENER 349
             |||......:...::|      .||:...|::|:..|.|..|...|:.:..||.:.|
  Fly   271 YACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHINDPR 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4820NP_001097748.1 zf-AD 5..75 CDD:462262 22/81 (27%)
SUF4-like 224..>279 CDD:411020 20/55 (36%)
C2H2 Zn finger 224..244 CDD:411020 6/19 (32%)
C2H2 Zn finger 224..244 CDD:275368 6/19 (32%)
C2H2 Zn finger 252..272 CDD:275368 6/19 (32%)
C2H2 Zn finger 279..297 CDD:275368 5/17 (29%)
C2H2 Zn finger 322..339 CDD:275368 5/16 (31%)
CG4424NP_650859.3 zf-AD 10..92 CDD:462262 24/86 (28%)
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
COG5048 210..>345 CDD:227381 34/119 (29%)
C2H2 Zn finger 217..237 CDD:275368 6/19 (32%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
C2H2 Zn finger 273..293 CDD:275368 3/19 (16%)
C2H2 Zn finger 301..320 CDD:275368 6/18 (33%)

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